Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | CDX79801 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | CDX83459 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | CDY17911 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | CDY44256 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | CDY13551 | AT5G44420.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02129 | Canola | nucleus | 92.97 | 94.82 |
| AT5G61600.1 | Thale cress | nucleus | 76.95 | 81.74 |
| CDY42869 | Canola | nucleus | 69.53 | 81.28 |
| CDY67760 | Canola | nucleus | 69.92 | 79.56 |
| CDY40779 | Canola | nucleus | 28.91 | 40.66 |
| CDY14036 | Canola | nucleus | 28.91 | 39.15 |
| CDX77538 | Canola | nucleus | 18.75 | 38.4 |
| CDY32941 | Canola | nucleus | 19.53 | 37.88 |
| CDY50478 | Canola | nucleus | 19.53 | 37.88 |
| CDY60497 | Canola | nucleus | 29.69 | 36.89 |
| CDY64666 | Canola | nucleus | 29.69 | 36.02 |
| CDX85071 | Canola | nucleus | 19.14 | 35.51 |
| CDY18225 | Canola | nucleus | 18.36 | 35.34 |
| CDX77537 | Canola | nucleus | 19.14 | 35.25 |
| CDY60663 | Canola | nucleus | 18.36 | 35.07 |
| CDY38052 | Canola | nucleus | 22.66 | 34.94 |
| CDY53187 | Canola | nucleus | 18.36 | 34.81 |
| CDY10057 | Canola | nucleus | 18.36 | 34.81 |
| CDY02130 | Canola | nucleus | 26.56 | 34.34 |
| CDY23053 | Canola | nucleus | 26.56 | 34.34 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 26.17 | 34.18 |
| CDY35516 | Canola | nucleus | 18.36 | 34.06 |
| CDX85070 | Canola | nucleus | 18.36 | 34.06 |
| CDY16811 | Canola | nucleus | 26.17 | 33.33 |
| CDX87222 | Canola | nucleus | 25.0 | 31.84 |
| CDY05842 | Canola | nucleus | 26.17 | 30.45 |
| CDX71695 | Canola | nucleus | 25.78 | 30.0 |
| GSMUA_Achr11P... | Banana | nucleus | 21.48 | 28.95 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 26.95 | 28.51 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 26.17 | 28.39 |
| Zm00001d029940_P001 | Maize | nucleus | 26.56 | 28.22 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 25.39 | 27.54 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 25.0 | 27.23 |
| CDY35515 | Canola | nucleus | 16.8 | 26.88 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 26.56 | 26.56 |
| CDX76569 | Canola | nucleus | 18.36 | 26.11 |
| CDY38401 | Canola | nucleus | 22.66 | 25.55 |
| CDY33523 | Canola | nucleus | 21.48 | 25.46 |
| CDY65883 | Canola | nucleus | 22.27 | 25.33 |
| OQU92128 | Sorghum | nucleus | 26.95 | 24.91 |
| CDX77750 | Canola | nucleus | 21.48 | 24.77 |
| CDY38399 | Canola | nucleus | 24.61 | 24.42 |
| CDY64687 | Canola | nucleus | 27.34 | 24.39 |
| CDY41042 | Canola | nucleus | 27.34 | 23.89 |
| CDY25977 | Canola | nucleus | 27.34 | 23.65 |
| CDY68787 | Canola | nucleus | 20.7 | 23.56 |
| CDY56473 | Canola | nucleus | 21.09 | 23.38 |
| CDY30489 | Canola | nucleus | 21.09 | 23.28 |
| CDX76570 | Canola | nucleus | 25.39 | 23.21 |
| CDY08986 | Canola | nucleus | 19.14 | 23.11 |
| CDY28965 | Canola | nucleus | 20.7 | 23.04 |
| CDY64966 | Canola | nucleus | 23.83 | 22.93 |
| CDX74692 | Canola | nucleus | 20.7 | 22.84 |
| CDY23459 | Canola | nucleus | 21.09 | 22.78 |
| CDY43434 | Canola | nucleus | 19.92 | 22.37 |
| CDY27923 | Canola | nucleus | 22.27 | 22.35 |
| CDX77755 | Canola | nucleus | 26.95 | 22.26 |
| Zm00001d002761_P001 | Maize | nucleus | 26.95 | 21.9 |
| CDY25978 | Canola | nucleus | 20.31 | 21.67 |
| CDY27922 | Canola | nucleus | 16.02 | 21.58 |
| Os04t0547600-01 | Rice | nucleus | 26.56 | 20.73 |
| EES11214 | Sorghum | nucleus | 23.05 | 20.7 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 26.95 | 20.54 |
| EES11211 | Sorghum | nucleus | 25.78 | 20.43 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 26.95 | 20.23 |
| Zm00001d017466_P001 | Maize | nucleus | 25.78 | 20.06 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 26.17 | 20.0 |
| Zm00001d002760_P001 | Maize | nucleus | 27.73 | 19.94 |
| KXG26836 | Sorghum | nucleus | 27.34 | 19.83 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 26.56 | 19.83 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 26.56 | 19.71 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 25.78 | 19.64 |
| KXG26835 | Sorghum | nucleus | 25.39 | 19.46 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 22.66 | 19.14 |
| Zm00001d051340_P001 | Maize | nucleus | 25.0 | 18.71 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 23.05 | 18.61 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 23.05 | 18.55 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 23.05 | 18.44 |
| KXG31094 | Sorghum | nucleus | 24.61 | 18.42 |
| OQU76347 | Sorghum | nucleus | 21.09 | 18.24 |
| Os02t0655200-02 | Rice | nucleus | 24.22 | 18.02 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 17.19 | 12.29 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078GDF8 | UniProt:A0A078GDF8 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY23052 | ProteinID:CDY23052 | ProteinID:CDY23052.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00021518001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE0BCD | SEG:seg | : | : | : | : |
Description
BnaC07g31350DBnaC07g31350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDF8]
Coordinates
chrLK032139:+:321196..322124
Molecular Weight (calculated)
28590.2 Da
IEP (calculated)
5.268
GRAVY (calculated)
-0.685
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKQESLAI EFISQHLLTD FAFTETEPSS FTLHETGPSL FTSQVHDYQL ETSSTTINNQ NHKPNSTLNR RKPPLPNLSV SRTVSGTVKK TEEEEGEEER
101: HYRGVRRRPW GKYAAEIRDP NKKGSRIWLG TYDRAVEAAR AYDQAAFQLR GRKAILNFPL DVRATSESFL EEGVNGKRKR VKSSPAVEED EKAVAVRVKV
201: EEEESDTTET TEAEVEAVPL TPSSWMGFWD VGAGDGIFSV PPLSPTSPNF SVISVT
101: HYRGVRRRPW GKYAAEIRDP NKKGSRIWLG TYDRAVEAAR AYDQAAFQLR GRKAILNFPL DVRATSESFL EEGVNGKRKR VKSSPAVEED EKAVAVRVKV
201: EEEESDTTET TEAEVEAVPL TPSSWMGFWD VGAGDGIFSV PPLSPTSPNF SVISVT
001: MATKQEALAI DFISQHLLTD FVSMETDHPS LFTNQLHNFH SETGPRTITN QSPKPNSTLN QRKPPLPNLS VSRTVSTKTE KEEEERHYRG VRRRPWGKYA
101: AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE
201: PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T
101: AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE
201: PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T
Arabidopsis Description
ERF104Ethylene-responsive transcription factor ERF104 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.