Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G111300.1 | |
| TraesCS7B01G009200.1 | |
| TraesCS7D01G106400.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | TraesCS7A01G111300.1 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | TraesCS7B01G009200.1 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | TraesCS7D01G106400.1 | AT2G43790.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G436100.1 | Wheat | nucleus | 92.13 | 92.67 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 93.0 | 92.46 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 83.67 | 85.42 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 83.38 | 85.12 |
| Os04t0547600-01 | Rice | nucleus | 59.18 | 61.89 |
| EES11211 | Sorghum | nucleus | 58.02 | 61.61 |
| Zm00001d002761_P001 | Maize | nucleus | 55.39 | 60.32 |
| KXG26835 | Sorghum | nucleus | 58.6 | 60.18 |
| KXG26836 | Sorghum | nucleus | 58.89 | 57.22 |
| EES11214 | Sorghum | nucleus | 46.94 | 56.49 |
| Zm00001d002760_P001 | Maize | nucleus | 58.6 | 56.46 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 43.44 | 47.0 |
| GSMUA_Achr11P... | Banana | nucleus | 25.95 | 46.84 |
| TraesCS4D01G313400.1 | Wheat | nucleus | 15.74 | 44.26 |
| TraesCS1D01G140900.1 | Wheat | nucleus | 15.16 | 43.7 |
| Bra035732.1-P | Field mustard | nucleus | 26.82 | 42.4 |
| CDX71695 | Canola | nucleus | 27.11 | 42.27 |
| CDY05842 | Canola | nucleus | 26.82 | 41.82 |
| AT5G51190.1 | Thale cress | nucleus | 25.66 | 39.82 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 27.99 | 39.67 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 27.11 | 38.59 |
| KRH28164 | Soybean | nucleus | 30.9 | 38.41 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 25.36 | 37.99 |
| KRH77324 | Soybean | nucleus | 30.32 | 37.82 |
| Solyc03g093550.1.1 | Tomato | nucleus | 26.24 | 37.34 |
| TraesCS5D01G076200.1 | Wheat | nucleus | 13.12 | 37.19 |
| Solyc03g093540.1.1 | Tomato | nucleus | 24.49 | 36.84 |
| OQU76347 | Sorghum | nucleus | 31.78 | 36.82 |
| Solyc03g093560.1.1 | Tomato | nucleus | 25.95 | 36.48 |
| PGSC0003DMT400027937 | Potato | nucleus | 26.82 | 36.36 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 29.45 | 36.33 |
| PGSC0003DMT400086995 | Potato | nucleus | 25.95 | 36.33 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 28.28 | 36.19 |
| TraesCS4D01G001200.1 | Wheat | nucleus | 13.41 | 35.94 |
| PGSC0003DMT400090475 | Potato | nucleus | 25.66 | 35.92 |
| KRH04191 | Soybean | nucleus | 28.28 | 35.27 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 11.37 | 35.14 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 27.7 | 34.55 |
| KRH57483 | Soybean | nucleus | 27.99 | 34.53 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 27.7 | 34.3 |
| CDY38399 | Canola | nucleus | 25.66 | 34.11 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 27.41 | 33.94 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 27.41 | 33.94 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 27.11 | 33.82 |
| CDY40779 | Canola | nucleus | 17.78 | 33.52 |
| Bra028690.1-P | Field mustard | nucleus | 17.78 | 33.52 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 25.66 | 33.33 |
| CDY64687 | Canola | nucleus | 27.11 | 32.4 |
| Bra040158.1-P | Field mustard | nucleus | 25.07 | 32.33 |
| CDY64966 | Canola | nucleus | 25.07 | 32.33 |
| CDY27922 | Canola | nucleus | 17.78 | 32.11 |
| CDY14036 | Canola | nucleus | 17.49 | 31.75 |
| PGSC0003DMT400041328 | Potato | nucleus | 18.95 | 31.55 |
| Bra024953.1-P | Field mustard | nucleus | 27.11 | 31.53 |
| CDX76570 | Canola | nucleus | 25.66 | 31.43 |
| PGSC0003DMT400041327 | Potato | nucleus | 27.11 | 31.42 |
| Solyc05g052030.1.1 | Tomato | nucleus | 18.37 | 31.34 |
| PGSC0003DMT400067472 | Potato | nucleus | 25.36 | 31.3 |
| KRG90129 | Soybean | nucleus | 24.2 | 31.2 |
| AT5G47230.1 | Thale cress | nucleus | 26.82 | 30.67 |
| Bra017493.1-P | Field mustard | nucleus | 26.24 | 30.61 |
| Bra021049.1-P | Field mustard | nucleus | 25.07 | 30.61 |
| CDY60497 | Canola | nucleus | 18.37 | 30.58 |
| Solyc08g078190.1.1 | Tomato | nucleus | 28.57 | 30.43 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 18.37 | 30.43 |
| CDY25977 | Canola | nucleus | 26.24 | 30.41 |
| CDY41042 | Canola | nucleus | 25.95 | 30.38 |
| KRH34607 | Soybean | nucleus | 17.78 | 30.35 |
| KRG92180 | Soybean | nucleus | 17.49 | 30.15 |
| AT4G17490.1 | Thale cress | nucleus | 24.78 | 30.14 |
| CDY42869 | Canola | nucleus | 19.24 | 30.14 |
| KRH33374 | Soybean | nucleus | 24.49 | 29.89 |
| CDY64666 | Canola | nucleus | 18.37 | 29.86 |
| Bra009250.1-P | Field mustard | nucleus | 18.37 | 29.86 |
| Bra029319.1-P | Field mustard | nucleus | 19.24 | 29.6 |
| CDY67760 | Canola | nucleus | 19.24 | 29.33 |
| KRG90130 | Soybean | nucleus | 17.78 | 29.19 |
| AT5G61590.1 | Thale cress | nucleus | 16.91 | 28.86 |
| CDY16811 | Canola | nucleus | 16.91 | 28.86 |
| CDX77755 | Canola | nucleus | 25.95 | 28.71 |
| Bra012939.1-P | Field mustard | nucleus | 16.33 | 28.28 |
| CDY02130 | Canola | nucleus | 16.33 | 28.28 |
| AT5G61600.1 | Thale cress | nucleus | 19.83 | 28.22 |
| Bra035919.1-P | Field mustard | nucleus | 16.62 | 28.08 |
| CDY23053 | Canola | nucleus | 16.04 | 27.78 |
| CDX87222 | Canola | nucleus | 16.04 | 27.36 |
| KRH33376 | Soybean | nucleus | 17.49 | 27.27 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 21.28 | 26.74 |
| CDY23052 | Canola | nucleus | 19.83 | 26.56 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 22.16 | 26.3 |
| CDY02129 | Canola | nucleus | 19.24 | 26.29 |
| Bra012938.1-P | Field mustard | nucleus | 19.53 | 25.97 |
| Solyc05g052040.1.1 | Tomato | nucleus | 27.11 | 25.48 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 23.03 | 25.0 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF54 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2D01G414300 | EnsemblPlants:TraesCS2D01G414300.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:-:528472445..528473875
Molecular Weight (calculated)
36590.7 Da
IEP (calculated)
5.036
GRAVY (calculated)
-0.438
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFAGEVDDF ALDLIREHLL GGDGGVLPTA NHDPAGPFCD DVTFPVLPPS AAEPQAYQQQ PMFFPQQEQQ QNQQMQAYMD LAHQYLNSCP SADVPEAVIR
101: APEPVMIQFG GQPSPVAAPS STLTISVPAK GSFGWAATAA APAPSAPAPL EDLRKYRGVR QRPWGKYAAE IRDPKRRGSR VWLGTYDTSV EAARAYDRAA
201: FRMRGAKAIL NFPNEVGTRG AELWAPPPPA TASQTAGATN KRKRSHEEDR DVEVTGVVIN KAPKNEAPSP SSAQVSWDTP SSVSRETASS TVTSAATAPE
301: GGLPPTPSSS GWEQYWEALL GGVPLLSPLS PHPALGFPQL TVS
101: APEPVMIQFG GQPSPVAAPS STLTISVPAK GSFGWAATAA APAPSAPAPL EDLRKYRGVR QRPWGKYAAE IRDPKRRGSR VWLGTYDTSV EAARAYDRAA
201: FRMRGAKAIL NFPNEVGTRG AELWAPPPPA TASQTAGATN KRKRSHEEDR DVEVTGVVIN KAPKNEAPSP SSAQVSWDTP SSVSRETASS TVTSAATAPE
301: GGLPPTPSSS GWEQYWEALL GGVPLLSPLS PHPALGFPQL TVS
001: MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG SSSSSFAPID FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
Arabidopsis Description
ERF5ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.