Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G281000.1 | Wheat | nucleus | 95.6 | 96.31 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 94.87 | 95.22 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 93.04 | 84.11 |
| Os02t0654700-01 | Rice | nucleus | 80.22 | 72.28 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 74.73 | 70.59 |
| KRG92185 | Soybean | nucleus | 19.41 | 58.24 |
| GSMUA_Achr11P... | Banana | nucleus | 49.08 | 50.0 |
| Bra021047.1-P | Field mustard | nucleus | 31.14 | 46.96 |
| CDX76569 | Canola | nucleus | 30.4 | 46.11 |
| KRH04192 | Soybean | nucleus | 41.39 | 45.02 |
| CDY38401 | Canola | nucleus | 37.36 | 44.93 |
| KRH57484 | Soybean | nucleus | 41.76 | 44.71 |
| PGSC0003DMT400041331 | Potato | nucleus | 37.0 | 43.91 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 38.46 | 43.75 |
| Solyc03g093610.1.1 | Tomato | nucleus | 38.46 | 43.39 |
| PGSC0003DMT400027932 | Potato | nucleus | 39.19 | 43.32 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 44.69 | 43.26 |
| CDY65883 | Canola | nucleus | 35.53 | 43.11 |
| CDY33523 | Canola | nucleus | 34.07 | 43.06 |
| CDY43434 | Canola | nucleus | 35.9 | 42.98 |
| PGSC0003DMT400005836 | Potato | nucleus | 31.14 | 42.71 |
| KRH77323 | Soybean | nucleus | 42.86 | 42.7 |
| CDX77750 | Canola | nucleus | 34.43 | 42.34 |
| Solyc05g052050.1.1 | Tomato | nucleus | 36.26 | 42.31 |
| CDY68787 | Canola | nucleus | 34.8 | 42.22 |
| Solyc08g007230.1.1 | Tomato | nucleus | 30.77 | 42.21 |
| KRH28165 | Soybean | nucleus | 41.39 | 42.01 |
| Bra022115.1-P | Field mustard | nucleus | 35.16 | 41.92 |
| Bra024954.1-P | Field mustard | nucleus | 33.33 | 41.74 |
| CDY28965 | Canola | nucleus | 35.16 | 41.74 |
| Bra040159.1-P | Field mustard | nucleus | 36.63 | 41.67 |
| KRH66522 | Soybean | nucleus | 29.67 | 41.54 |
| CDY25978 | Canola | nucleus | 36.26 | 41.25 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 32.23 | 41.12 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 30.77 | 40.58 |
| Bra021048.1-P | Field mustard | nucleus | 37.73 | 40.55 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 30.4 | 40.49 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 30.4 | 40.49 |
| CDY27923 | Canola | nucleus | 37.73 | 40.39 |
| Bra032665.1-P | Field mustard | nucleus | 23.44 | 40.25 |
| Bra017495.1-P | Field mustard | nucleus | 35.9 | 40.0 |
| PGSC0003DMT400067534 | Potato | nucleus | 34.07 | 39.91 |
| AT5G47220.1 | Thale cress | nucleus | 35.16 | 39.51 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 47.62 | 39.27 |
| CDY38052 | Canola | nucleus | 23.81 | 39.16 |
| AT4G17500.1 | Thale cress | nucleus | 38.1 | 38.81 |
| PGSC0003DMT400067535 | Potato | nucleus | 32.97 | 38.46 |
| Solyc08g078170.1.1 | Tomato | nucleus | 33.33 | 38.4 |
| KRH48809 | Soybean | nucleus | 21.61 | 38.06 |
| TraesCS1D01G140900.1 | Wheat | nucleus | 16.48 | 37.82 |
| Solyc08g078180.1.1 | Tomato | nucleus | 32.23 | 37.61 |
| TraesCS4D01G001200.1 | Wheat | nucleus | 17.22 | 36.72 |
| KRH66533 | Soybean | nucleus | 20.15 | 36.42 |
| KRH01076 | Soybean | nucleus | 26.37 | 35.64 |
| TraesCS5D01G076200.1 | Wheat | nucleus | 15.75 | 35.54 |
| TraesCS4D01G313400.1 | Wheat | nucleus | 15.75 | 35.25 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 26.37 | 35.12 |
| KRH40171 | Soybean | nucleus | 26.01 | 34.98 |
| KRH01077 | Soybean | nucleus | 26.74 | 34.6 |
| AT2G44840.1 | Thale cress | nucleus | 28.57 | 34.51 |
| CDY30489 | Canola | nucleus | 28.94 | 34.05 |
| KRH48815 | Soybean | nucleus | 29.67 | 33.75 |
| CDX74692 | Canola | nucleus | 28.57 | 33.62 |
| Bra004873.1-P | Field mustard | nucleus | 28.57 | 33.62 |
| CDY56473 | Canola | nucleus | 28.21 | 33.33 |
| Bra037630.1-P | Field mustard | nucleus | 28.57 | 33.19 |
| KRH01075 | Soybean | nucleus | 19.78 | 32.93 |
| CDY23459 | Canola | nucleus | 28.57 | 32.91 |
| PGSC0003DMT400091474 | Potato | nucleus | 21.61 | 32.78 |
| Solyc01g090310.2.1 | Tomato | nucleus | 21.61 | 32.78 |
| KRH48811 | Soybean | nucleus | 24.54 | 32.68 |
| KRH66529 | Soybean | nucleus | 22.34 | 32.28 |
| KRH66532 | Soybean | nucleus | 26.01 | 31.84 |
| Solyc01g090320.2.1 | Tomato | nucleus | 21.25 | 31.18 |
| KRH66525 | Soybean | nucleus | 22.34 | 30.96 |
| PGSC0003DMT400067020 | Potato | nucleus | 22.71 | 30.69 |
| Solyc01g090300.2.1 | Tomato | nucleus | 22.34 | 30.2 |
| PGSC0003DMT400066846 | Potato | nucleus | 24.54 | 30.18 |
| PGSC0003DMT400018085 | Potato | nucleus | 20.51 | 29.63 |
| PGSC0003DMT400066853 | Potato | nucleus | 18.68 | 29.48 |
| PGSC0003DMT400091002 | Potato | nucleus | 23.44 | 29.36 |
| Solyc01g090340.2.1 | Tomato | nucleus | 23.44 | 29.22 |
| Solyc05g050790.1.1 | Tomato | nucleus | 20.15 | 29.1 |
| Solyc01g090370.1.1 | Tomato | nucleus | 23.44 | 28.96 |
| PGSC0003DMT400067018 | Potato | nucleus | 23.44 | 28.32 |
| PGSC0003DMT400097101 | Potato | nucleus | 22.34 | 27.85 |
| PGSC0003DMT400067013 | Potato | nucleus | 23.08 | 27.63 |
| KRH66526 | Soybean | nucleus | 19.78 | 27.41 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 27.11 | 23.34 |
| KRH66523 | Soybean | nucleus | 14.29 | 23.21 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 27.11 | 22.02 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 26.74 | 21.28 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF65 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6D01G225500 | EnsemblPlants:TraesCS6D01G225500.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr6D:-:317105411..317106442
Molecular Weight (calculated)
28706.8 Da
IEP (calculated)
6.033
GRAVY (calculated)
-0.256
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLNPASEA AAAAALDSIR QQLLEEPARP AYCRSASFGS LVADQWSESL PFRPNDADDM VVYGALRDAF SCGWLPDGSF AAVKPEPLPS PGSYDGSCLG
101: SFLASPPELD APWTEEEAEV AATASRGKHF RGVRQRPWGK FAAEIRDPAK NGARVWLGTF DSAEDAAVAY DRAAYRMRGS RALLNFPLRI GSEIAAAAAA
201: AGQKRPSPQP ASPDSPPPSS SAPGSSKRRK RGEAAAASMA MALVPPPPVQ APVQLTLPAQ PWLATGAVQQ LVS
101: SFLASPPELD APWTEEEAEV AATASRGKHF RGVRQRPWGK FAAEIRDPAK NGARVWLGTF DSAEDAAVAY DRAAYRMRGS RALLNFPLRI GSEIAAAAAA
201: AGQKRPSPQP ASPDSPPPSS SAPGSSKRRK RGEAAAASMA MALVPPPPVQ APVQLTLPAQ PWLATGAVQQ LVS
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.