Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G001400.1 | Wheat | nucleus | 100.0 | 97.71 |
| TraesCS4B01G001900.1 | Wheat | nucleus | 96.88 | 95.38 |
| HORVU4Hr1G000960.1 | Barley | nucleus | 96.88 | 92.54 |
| KXG35151 | Sorghum | nucleus | 71.09 | 70.54 |
| Zm00001d019744_P001 | Maize | nucleus | 70.31 | 66.18 |
| TraesCS5D01G076200.1 | Wheat | nucleus | 62.5 | 66.12 |
| Zm00001d005309_P001 | Maize | nucleus | 67.19 | 65.15 |
| Os09t0571700-00 | Rice | nucleus | 64.84 | 63.36 |
| GSMUA_Achr4P05510_001 | Banana | nucleus | 39.84 | 55.43 |
| GSMUA_Achr4P12070_001 | Banana | nucleus | 52.34 | 52.76 |
| TraesCS1D01G140900.1 | Wheat | nucleus | 48.44 | 52.1 |
| VIT_05s0049g00490.t01 | Wine grape | nucleus | 50.0 | 49.23 |
| TraesCS4D01G313400.1 | Wheat | nucleus | 46.09 | 48.36 |
| PGSC0003DMT400044383 | Potato | nucleus | 52.34 | 48.2 |
| Solyc09g089910.1.1 | Tomato | nucleus | 52.34 | 46.85 |
| PGSC0003DMT400034871 | Potato | nucleus | 45.31 | 46.4 |
| VIT_07s0005g03210.t01 | Wine grape | nucleus | 52.34 | 46.21 |
| Solyc03g005500.1.1 | Tomato | nucleus | 46.09 | 45.74 |
| KRH34485 | Soybean | nucleus | 52.34 | 45.58 |
| KRG92309 | Soybean | nucleus | 51.56 | 44.9 |
| VIT_07s0005g03200.t01 | Wine grape | nucleus | 51.56 | 43.14 |
| VIT_07s0005g03190.t01 | Wine grape | nucleus | 50.0 | 41.03 |
| KRH69131 | Soybean | nucleus | 52.34 | 39.88 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 39.84 | 17.65 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 36.72 | 17.22 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 38.28 | 14.58 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 35.94 | 14.51 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 35.94 | 13.41 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 |
| PANTHER:PTHR31190:SF71 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS4D01G001200 | EnsemblPlants:TraesCS4D01G001200.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:738967..739353
Molecular Weight (calculated)
14311.3 Da
IEP (calculated)
6.974
GRAVY (calculated)
-1.084
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGEGSGGG EPTKYRGVRR RPWGKFAAEI RDSSRHGVRM WLGTFDTAEE AAAAYDRSAY SMRGRNAVLN FPDRAHVYEA EARRQGQGSS SSARQQNQQQ
101: GQSGVIEFEY LDDDVLQSML HDHDKSNK
101: GQSGVIEFEY LDDDVLQSML HDHDKSNK
001: MDQGGRGVGA EHGKYRGVRR RPWGKYAAEI RDSRKHGERV WLGTFDTAEE AARAYDQAAY SMRGQAAILN FPHEYNMGSG VSSSTAMAGS SSASASASSS
101: SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K
101: SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K
Arabidopsis Description
ERF096Ethylene-responsive transcription factor ERF096 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.