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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g089910.1.1 Tomato nucleus 95.68 93.01
PGSC0003DMT400034871 Potato nucleus 59.71 66.4
VIT_05s0049g00490.t01 Wine grape nucleus 57.55 61.54
GSMUA_Achr4P05510_001 Banana nucleus 38.85 58.7
KRH34485 Soybean nucleus 60.43 57.14
KXG25362 Sorghum nucleus 53.24 56.49
KRG92309 Soybean nucleus 59.71 56.46
TraesCS5D01G076200.1 Wheat nucleus 48.92 56.2
TraesCS5B01G072200.1 Wheat nucleus 48.92 56.2
TraesCS5A01G065400.1 Wheat nucleus 48.92 56.2
HORVU5Hr1G017540.1 Barley nucleus 50.36 55.56
Zm00001d049903_P001 Maize nucleus 48.92 54.84
GSMUA_Achr4P12070_001 Banana nucleus 49.64 54.33
KXG35151 Sorghum nucleus 50.36 54.26
VIT_07s0005g03190.t01 Wine grape nucleus 60.43 53.85
VIT_07s0005g03210.t01 Wine grape nucleus 55.4 53.1
TraesCS4B01G001900.1 Wheat nucleus 49.64 53.08
TraesCS4D01G001200.1 Wheat nucleus 48.2 52.34
Zm00001d005309_P001 Maize nucleus 49.64 52.27
Zm00001d019744_P001 Maize nucleus 51.08 52.21
TraesCS4A01G001400.1 Wheat nucleus 48.92 51.91
HORVU0Hr1G010370.3 Barley nucleus 48.92 51.13
Os09t0571700-00 Rice nucleus 47.48 50.38
VIT_07s0005g03200.t01 Wine grape nucleus 55.4 50.33
HORVU4Hr1G000960.1 Barley nucleus 48.2 50.0
TraesCS6B01G069200.1 Wheat nucleus 45.32 49.61
KRH69131 Soybean nucleus 58.99 48.81
PGSC0003DMT400026678 Potato nucleus 50.36 44.59
PGSC0003DMT400097075 Potato nucleus 46.76 44.52
PGSC0003DMT400034984 Potato nucleus 47.48 42.04
PGSC0003DMT400027849 Potato nucleus 41.73 31.87
PGSC0003DMT400005836 Potato nucleus 39.57 27.64
PGSC0003DMT400091474 Potato nucleus 33.81 26.11
PGSC0003DMT400091002 Potato nucleus 39.57 25.23
PGSC0003DMT400018085 Potato nucleus 33.81 24.87
PGSC0003DMT400067020 Potato nucleus 35.97 24.75
PGSC0003DMT400041328 Potato nucleus 35.97 24.27
PGSC0003DMT400066853 Potato nucleus 29.5 23.7
PGSC0003DMT400067535 Potato nucleus 39.57 23.5
PGSC0003DMT400041331 Potato nucleus 38.13 23.04
PGSC0003DMT400086995 Potato nucleus 40.29 22.86
PGSC0003DMT400067534 Potato nucleus 37.41 22.32
PGSC0003DMT400090475 Potato nucleus 38.85 22.04
PGSC0003DMT400027937 Potato nucleus 38.85 21.34
PGSC0003DMT400067018 Potato nucleus 34.53 21.24
PGSC0003DMT400067013 Potato nucleus 34.53 21.05
PGSC0003DMT400027932 Potato nucleus 37.41 21.05
PGSC0003DMT400097101 Potato nucleus 32.37 20.55
PGSC0003DMT400066846 Potato nucleus 32.37 20.27
PGSC0003DMT400041327 Potato nucleus 38.85 18.24
PGSC0003DMT400067472 Potato nucleus 35.25 17.63
Protein Annotations
EntrezGene:102593271MapMan:15.5.7.1MapMan:15.5.7.2Gene3D:3.30.730.10InterPro:AP2/ERF-transcript_factorInterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR001471InterPro:IPR036955UniProt:M1BG41PFAM:PF00847EnsemblPlantsGene:PGSC0003DMG400017233PGSC:PGSC0003DMG400017233
EnsemblPlants:PGSC0003DMT400044383PIRSF:PIRSF038123PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31190PANTHER:PTHR31190:SF68
SMART:SM00380SUPFAM:SSF54171UniParc:UPI000295DC46RefSeq:XP_006354501.1SEG:seg:
Description
Ethylene-responsive transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400017233]
Coordinates
chr9:+:56222853..56223847
Molecular Weight (calculated)
15466.7 Da
IEP (calculated)
6.537
GRAVY (calculated)
-0.892
Length
139 amino acids
Sequence
(BLAST)
001: MEQDPSNGRR TNGGGGGGGE IKYRGVRRRP WGKFAAEIRD SARQGARVWL GTFNTAEEAA RAYDRAAYSM RGHLAILNFP EEYNLPTSSS HFYSAGSYSS
101: PSMASSSSSS SRQVLEFEYL DDKLLEELLD CDEEPNKRK
Best Arabidopsis Sequence Match ( AT3G23230.1 )
(BLAST)
001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
Arabidopsis Description
ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.