Factsheet for HORVU4Hr1G000960.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G001200.1	Wheat	nucleus	92.54	96.88
TraesCS4A01G001400.1	Wheat	nucleus	93.28	95.42
TraesCS4B01G001900.1	Wheat	nucleus	90.3	93.08
KXG35151	Sorghum	nucleus	67.91	70.54
Zm00001d019744_P001	Maize	nucleus	68.66	67.65
Zm00001d005309_P001	Maize	nucleus	64.93	65.91
HORVU5Hr1G017540.1	Barley	nucleus	60.45	64.29
Os09t0571700-00	Rice	nucleus	61.19	62.6
HORVU0Hr1G010370.3	Barley	nucleus	58.21	58.65
GSMUA_Achr4P05510_001	Banana	nucleus	38.81	56.52
GSMUA_Achr4P12070_001	Banana	nucleus	50.75	53.54
HORVU1Hr1G037530.1	Barley	nucleus	44.78	48.78
PGSC0003DMT400044383	Potato	nucleus	50.0	48.2
HORVU4Hr1G080300.1	Barley	nucleus	44.03	47.97
VIT_05s0049g00490.t01	Wine grape	nucleus	46.27	47.69
PGSC0003DMT400034871	Potato	nucleus	44.03	47.2
Solyc03g005500.1.1	Tomato	nucleus	44.78	46.51
Solyc09g089910.1.1	Tomato	nucleus	49.25	46.15
KRH34485	Soybean	nucleus	50.0	45.58
VIT_07s0005g03210.t01	Wine grape	nucleus	49.25	45.52
KRG92309	Soybean	nucleus	49.25	44.9
VIT_07s0005g03200.t01	Wine grape	nucleus	48.51	42.48
VIT_07s0005g03190.t01	Wine grape	nucleus	47.01	40.38
KRH69131	Soybean	nucleus	49.25	39.29
HORVU1Hr1G055710.1	Barley	nucleus	32.84	18.18
HORVU6Hr1G062380.3	Barley	nucleus	35.82	15.89
HORVU6Hr1G062430.1	Barley	nucleus	34.33	15.18
HORVU2Hr1G098140.2	Barley	mitochondrion, nucleus	19.4	7.26

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A287MWI1	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G000960
EnsemblPlants:HORVU4Hr1G000960.1	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF71	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B47CB41
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:1356682..1357123

Molecular Weight (calculated)

14983.1 Da

IEP (calculated)

6.525

GRAVY (calculated)

-1.108

Length

134 amino acids

Sequence
(BLAST)

001: EREIMEGGEG SGGGGGEPTK YRGVRRRPWG KYAAEIRDSS RHGVRMWLGT FDTAEEAAAA YDRSAYSMRG RNAVLNFPDR AHVYEAEARR QGGASSSSAR
101: QQNQQQQQSG VIEFEYLDDD VLQSMLHDHD KSNK

Best Arabidopsis Sequence Match ( AT5G43410.1 )
(BLAST)

001: MDQGGRGVGA EHGKYRGVRR RPWGKYAAEI RDSRKHGERV WLGTFDTAEE AARAYDQAAY SMRGQAAILN FPHEYNMGSG VSSSTAMAGS SSASASASSS
101: SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K

Arabidopsis Description

ERF096Ethylene-responsive transcription factor ERF096 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.