Factsheet for HORVU1Hr1G037530.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G158400.1	Wheat	nucleus	86.18	89.08
TraesCS1A01G141800.1	Wheat	nucleus	85.37	88.24
TraesCS1D01G140900.1	Wheat	nucleus	83.74	86.55
HORVU4Hr1G080300.1	Barley	nucleus	67.48	67.48
KXG38440	Sorghum	nucleus	71.54	63.77
Zm00001d014113_P001	Maize	nucleus	70.73	63.5
KRG95653	Soybean	nucleus	56.91	56.45
GSMUA_Achr1P15350_001	Banana	nucleus	52.85	54.62
KRH19547	Soybean	nucleus	55.28	49.28
HORVU5Hr1G017540.1	Barley	nucleus	50.41	49.21
KRH32175	Soybean	nucleus	54.47	48.91
CDX77538	Canola	nucleus	48.78	48.0
AT3G23220.1	Thale cress	nucleus	53.66	47.48
AT5G43410.1	Thale cress	nucleus	48.78	45.8
CDX85070	Canola	nucleus	51.22	45.65
CDY50478	Canola	nucleus	48.78	45.45
CDY32941	Canola	nucleus	48.78	45.45
Bra027493.1-P	Field mustard	nucleus	48.78	45.45
HORVU0Hr1G010370.3	Barley	nucleus	48.78	45.11
Bra014924.1-P	Field mustard	nucleus	50.41	44.93
HORVU4Hr1G000960.1	Barley	nucleus	48.78	44.78
CDY10057	Canola	nucleus	48.78	44.44
AT1G04370.1	Thale cress	nucleus	47.97	44.36
CDY18225	Canola	nucleus	47.97	44.36
CDY60663	Canola	nucleus	47.97	44.03
Bra015310.1-P	Field mustard	nucleus	47.97	44.03
CDY53187	Canola	nucleus	47.97	43.7
Bra032512.1-P	Field mustard	nucleus	48.78	43.48
CDY35515	Canola	nucleus	40.65	31.25
Bra023749.1-P	Field mustard	nucleus	27.64	28.33
HORVU1Hr1G055710.1	Barley	nucleus	39.02	19.83
HORVU6Hr1G062430.1	Barley	nucleus	40.65	16.5
HORVU6Hr1G062380.3	Barley	nucleus	35.77	14.57
HORVU2Hr1G098140.2	Barley	mitochondrion, nucleus	19.51	6.7

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A287F5M9	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G037530
EnsemblPlants:HORVU1Hr1G037530.1	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF42	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B471B6E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:257201694..257202126

Molecular Weight (calculated)

13062.1 Da

IEP (calculated)

5.945

GRAVY (calculated)

-0.741

Length

123 amino acids

Sequence
(BLAST)

001: MEDDKKTKYR GVRTRPWGKF AAEIRDPERG GVRVWLGTFN TAEEAARAYD RAAVAQRGAT AVLNFPGGPG LGSRGASGSS SSTPVGSGVD SGRGHGGTEK
101: IELEYLDDSL LDELLDDNKY GGK

Best Arabidopsis Sequence Match ( AT3G23230.1 )
(BLAST)

001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR

Arabidopsis Description

ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.