Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027493.1-P | Field mustard | nucleus | 97.73 | 97.73 |
| CDY32941 | Canola | nucleus | 97.73 | 97.73 |
| AT5G43410.1 | Thale cress | nucleus | 87.12 | 87.79 |
| CDY60663 | Canola | nucleus | 82.58 | 81.34 |
| CDY18225 | Canola | nucleus | 81.82 | 81.2 |
| CDY10057 | Canola | nucleus | 80.3 | 78.52 |
| CDY53187 | Canola | nucleus | 79.55 | 77.78 |
| GSMUA_Achr1P15350_001 | Banana | nucleus | 53.79 | 59.66 |
| CDX77538 | Canola | nucleus | 53.79 | 56.8 |
| KRG95653 | Soybean | nucleus | 51.52 | 54.84 |
| CDX85070 | Canola | nucleus | 56.82 | 54.35 |
| TraesCS4A01G416000.1 | Wheat | nucleus | 49.24 | 52.85 |
| TraesCS4B01G316800.1 | Wheat | nucleus | 48.48 | 52.46 |
| TraesCS4D01G313400.1 | Wheat | nucleus | 48.48 | 52.46 |
| CDY35516 | Canola | nucleus | 54.55 | 52.17 |
| HORVU4Hr1G080300.1 | Barley | nucleus | 48.48 | 52.03 |
| KRH32175 | Soybean | nucleus | 53.79 | 51.82 |
| KRH19547 | Soybean | nucleus | 53.79 | 51.45 |
| TraesCS1D01G140900.1 | Wheat | nucleus | 46.21 | 51.26 |
| TraesCS1B01G158400.1 | Wheat | nucleus | 46.21 | 51.26 |
| CDX85071 | Canola | nucleus | 53.03 | 50.72 |
| TraesCS1A01G141800.1 | Wheat | nucleus | 45.45 | 50.42 |
| CDX77537 | Canola | nucleus | 53.03 | 50.36 |
| Zm00001d014113_P001 | Maize | nucleus | 51.52 | 49.63 |
| Zm00001d027686_P001 | Maize | nucleus | 48.48 | 49.23 |
| HORVU1Hr1G037530.1 | Barley | nucleus | 45.45 | 48.78 |
| KXG38440 | Sorghum | nucleus | 50.76 | 48.55 |
| Os04t0257500-01 | Rice | nucleus | 46.97 | 48.44 |
| Os03t0150200-00 | Rice | nucleus | 48.48 | 45.39 |
| KXG40163 | Sorghum | nucleus | 43.94 | 43.61 |
| CDY35515 | Canola | nucleus | 43.18 | 35.62 |
| CDY08986 | Canola | nucleus | 55.3 | 34.43 |
| Zm00001d027687_P001 | Maize | plastid | 18.94 | 33.78 |
| CDY38052 | Canola | nucleus | 38.64 | 30.72 |
| CDX76569 | Canola | nucleus | 37.12 | 27.22 |
| CDY40779 | Canola | nucleus | 36.36 | 26.37 |
| CDX71695 | Canola | nucleus | 43.18 | 25.91 |
| CDY33523 | Canola | nucleus | 40.91 | 25.0 |
| CDY05842 | Canola | nucleus | 41.67 | 25.0 |
| CDY14036 | Canola | nucleus | 35.61 | 24.87 |
| CDY43434 | Canola | nucleus | 42.42 | 24.56 |
| CDY68787 | Canola | nucleus | 41.67 | 24.44 |
| CDX77750 | Canola | nucleus | 40.91 | 24.32 |
| CDY25978 | Canola | nucleus | 42.42 | 23.33 |
| CDY42869 | Canola | nucleus | 38.64 | 23.29 |
| CDY38401 | Canola | nucleus | 39.39 | 22.91 |
| CDY16811 | Canola | nucleus | 34.85 | 22.89 |
| CDY60497 | Canola | nucleus | 35.61 | 22.82 |
| CDY64666 | Canola | nucleus | 36.36 | 22.75 |
| CDY23053 | Canola | nucleus | 34.09 | 22.73 |
| CDY02130 | Canola | nucleus | 34.09 | 22.73 |
| CDY67760 | Canola | nucleus | 38.64 | 22.67 |
| CDY65883 | Canola | nucleus | 38.64 | 22.67 |
| CDY28965 | Canola | nucleus | 39.39 | 22.61 |
| CDX87222 | Canola | nucleus | 34.09 | 22.39 |
| CDY30489 | Canola | nucleus | 37.88 | 21.55 |
| CDX74692 | Canola | nucleus | 37.12 | 21.12 |
| CDY27923 | Canola | nucleus | 40.15 | 20.78 |
| CDY56473 | Canola | nucleus | 36.36 | 20.78 |
| CDY23459 | Canola | nucleus | 37.12 | 20.68 |
| CDY02129 | Canola | nucleus | 37.88 | 19.92 |
| CDY38399 | Canola | nucleus | 38.64 | 19.77 |
| CDY23052 | Canola | nucleus | 37.88 | 19.53 |
| CDY64966 | Canola | nucleus | 38.64 | 19.17 |
| CDX76570 | Canola | nucleus | 39.39 | 18.57 |
| CDY64687 | Canola | nucleus | 39.39 | 18.12 |
| CDY27922 | Canola | nucleus | 25.76 | 17.89 |
| CDY25977 | Canola | nucleus | 39.39 | 17.57 |
| CDY41042 | Canola | nucleus | 38.64 | 17.41 |
| CDX77755 | Canola | nucleus | 38.64 | 16.45 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078IN68 | UniProt:A0A078IN68 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY50478 | ProteinID:CDY50478 | ProteinID:CDY50478.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00096857001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF71 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EE965C | SEG:seg | : | : |
Description
BnaC09g17590DBnaC09g17590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN68]
Coordinates
chrLK032915:+:21401..21799
Molecular Weight (calculated)
14543.7 Da
IEP (calculated)
8.821
GRAVY (calculated)
-1.001
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQGGRGSGA GEQGKYRGVR RRPWGKYAAE IRDSRKHGER VWLGTFDTAE EAARAYDQAA YSMRGQAAIL NFPHEYNMGS GGSATVAGSS SSSASSSRQV
101: FEFEYLDDSV LEELLEDREN PSKNNINKGK KK
101: FEFEYLDDSV LEELLEDREN PSKNNINKGK KK
001: MDQGGRGVGA EHGKYRGVRR RPWGKYAAEI RDSRKHGERV WLGTFDTAEE AARAYDQAAY SMRGQAAILN FPHEYNMGSG VSSSTAMAGS SSASASASSS
101: SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K
101: SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K
Arabidopsis Description
ERF096Ethylene-responsive transcription factor ERF096 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.