Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023748.1-P | Field mustard | nucleus | 63.21 | 97.1 |
| CDY35516 | Canola | nucleus | 62.74 | 96.38 |
| CDX85071 | Canola | nucleus | 59.91 | 92.03 |
| CDX77537 | Canola | nucleus | 59.91 | 91.37 |
| AT3G23230.1 | Thale cress | nucleus | 58.96 | 89.93 |
| KRG92310 | Soybean | nucleus | 38.21 | 60.45 |
| KRH34484 | Soybean | nucleus | 39.62 | 59.57 |
| KRH12208 | Soybean | nucleus | 33.49 | 58.68 |
| KRH31710 | Soybean | nucleus | 37.26 | 57.66 |
| KRH37227 | Soybean | nucleus | 32.55 | 56.56 |
| CDY60663 | Canola | nucleus | 35.38 | 55.97 |
| VIT_05s0049g00500.t01 | Wine grape | nucleus | 40.09 | 55.92 |
| CDY18225 | Canola | nucleus | 34.91 | 55.64 |
| CDY10057 | Canola | nucleus | 35.38 | 55.56 |
| CDY50478 | Canola | nucleus | 34.43 | 55.3 |
| CDY32941 | Canola | nucleus | 34.43 | 55.3 |
| CDY53187 | Canola | nucleus | 34.91 | 54.81 |
| KRH37228 | Soybean | nucleus | 35.38 | 54.74 |
| CDX77538 | Canola | nucleus | 31.6 | 53.6 |
| KRH12207 | Soybean | nucleus | 32.08 | 51.52 |
| KRH37226 | Soybean | nucleus | 28.3 | 50.85 |
| Solyc09g089920.1.1 | Tomato | nucleus | 35.38 | 49.34 |
| CDX85070 | Canola | nucleus | 32.08 | 49.28 |
| PGSC0003DMT400097075 | Potato | nucleus | 33.49 | 48.63 |
| PGSC0003DMT400034984 | Potato | nucleus | 33.96 | 45.86 |
| Solyc03g005510.1.1 | Tomato | nucleus, plastid | 33.96 | 41.14 |
| CDY35515 | Canola | nucleus | 27.36 | 36.25 |
| CDY38052 | Canola | nucleus | 24.53 | 31.33 |
| CDX76569 | Canola | nucleus | 24.53 | 28.89 |
| CDY40779 | Canola | nucleus | 24.06 | 28.02 |
| CDY14036 | Canola | nucleus | 23.11 | 25.93 |
| CDY33523 | Canola | nucleus | 25.94 | 25.46 |
| CDY16811 | Canola | nucleus | 24.06 | 25.37 |
| CDY02130 | Canola | nucleus | 23.58 | 25.25 |
| CDY23053 | Canola | nucleus | 23.58 | 25.25 |
| CDX77750 | Canola | nucleus | 26.42 | 25.23 |
| CDX71695 | Canola | nucleus | 25.94 | 25.0 |
| CDY68787 | Canola | nucleus | 26.42 | 24.89 |
| CDX87222 | Canola | nucleus | 23.58 | 24.88 |
| CDY05842 | Canola | nucleus | 25.47 | 24.55 |
| CDY60497 | Canola | nucleus | 23.58 | 24.27 |
| CDY56473 | Canola | nucleus | 26.42 | 24.24 |
| CDY42869 | Canola | nucleus | 24.53 | 23.74 |
| CDX74692 | Canola | nucleus | 25.94 | 23.71 |
| CDY64666 | Canola | nucleus | 23.58 | 23.7 |
| CDY43434 | Canola | nucleus | 25.47 | 23.68 |
| CDY30489 | Canola | nucleus | 25.47 | 23.28 |
| CDY65883 | Canola | nucleus | 24.53 | 23.11 |
| CDY67760 | Canola | nucleus | 24.53 | 23.11 |
| CDY28965 | Canola | nucleus | 25.0 | 23.04 |
| CDY38401 | Canola | nucleus | 24.53 | 22.91 |
| CDY25978 | Canola | nucleus | 25.47 | 22.5 |
| CDY23459 | Canola | nucleus | 25.0 | 22.36 |
| CDY38399 | Canola | nucleus | 26.42 | 21.71 |
| CDY27923 | Canola | nucleus | 25.47 | 21.18 |
| CDY64966 | Canola | nucleus | 26.42 | 21.05 |
| CDX76570 | Canola | nucleus | 26.42 | 20.0 |
| CDY02129 | Canola | nucleus | 23.11 | 19.52 |
| CDY23052 | Canola | nucleus | 23.11 | 19.14 |
| CDY27922 | Canola | nucleus | 16.98 | 18.95 |
| CDY64687 | Canola | nucleus | 24.53 | 18.12 |
| CDY41042 | Canola | nucleus | 25.0 | 18.09 |
| CDY25977 | Canola | nucleus | 25.0 | 17.91 |
| CDX77755 | Canola | nucleus | 25.0 | 17.1 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078F6F2 | UniProt:A0A078F6F2 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY08986 | ProteinID:CDY08986 | ProteinID:CDY08986.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00001072001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF68 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE4829 | SEG:seg | : | : | : | : |
Description
BnaC01g31050DBnaC01g31050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6F2]
Coordinates
chrLK031991:+:245786..247029
Molecular Weight (calculated)
24028.0 Da
IEP (calculated)
9.342
GRAVY (calculated)
-0.872
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGTNRRSNN QIQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEDAARAY DRAAYNLRGH LAILNFPNEY YSRMDDYSLR PPYSSSSSSS
101: GSTSTGVSRK NQREVFEFEY LDDKVLEELL DTEERNKRYR GCTGVESVVP LPPDAIDNGL RSKAFEGPRG RRVPDAHPIR EGCPGVEVQT VVQSVDVPRF
201: AHLLHIARRG GP
101: GSTSTGVSRK NQREVFEFEY LDDKVLEELL DTEERNKRYR GCTGVESVVP LPPDAIDNGL RSKAFEGPRG RRVPDAHPIR EGCPGVEVQT VVQSVDVPRF
201: AHLLHIARRG GP
001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
Arabidopsis Description
ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.