Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28965 | Canola | nucleus | 96.44 | 94.35 |
| Bra022115.1-P | Field mustard | nucleus | 96.0 | 94.32 |
| CDX77750 | Canola | nucleus | 77.33 | 78.38 |
| CDY33523 | Canola | nucleus | 74.67 | 77.78 |
| CDY25978 | Canola | nucleus | 79.56 | 74.58 |
| CDY43434 | Canola | nucleus | 74.22 | 73.25 |
| AT5G47220.1 | Thale cress | nucleus | 77.33 | 71.6 |
| CDY38401 | Canola | nucleus | 63.56 | 63.0 |
| CDY65883 | Canola | nucleus | 62.22 | 62.22 |
| CDX76569 | Canola | nucleus | 48.0 | 60.0 |
| CDY27923 | Canola | nucleus | 65.33 | 57.65 |
| KRH04192 | Soybean | nucleus | 54.67 | 49.0 |
| KRH57484 | Soybean | nucleus | 54.22 | 47.84 |
| KRH77323 | Soybean | nucleus | 57.33 | 47.08 |
| KRH28165 | Soybean | nucleus | 55.11 | 46.1 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 56.0 | 44.68 |
| CDX77537 | Canola | nucleus | 26.22 | 42.45 |
| CDX85071 | Canola | nucleus | 25.78 | 42.03 |
| CDY50478 | Canola | nucleus | 24.44 | 41.67 |
| CDY32941 | Canola | nucleus | 24.44 | 41.67 |
| CDX77538 | Canola | nucleus | 23.11 | 41.6 |
| CDY10057 | Canola | nucleus | 24.89 | 41.48 |
| CDY53187 | Canola | nucleus | 24.89 | 41.48 |
| CDY18225 | Canola | nucleus | 24.44 | 41.35 |
| CDY60663 | Canola | nucleus | 24.44 | 41.04 |
| CDY35516 | Canola | nucleus | 24.89 | 40.58 |
| CDY38052 | Canola | nucleus | 28.44 | 38.55 |
| GSMUA_Achr11P... | Banana | nucleus | 43.56 | 36.57 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 32.44 | 35.61 |
| CDX85070 | Canola | nucleus | 21.78 | 35.51 |
| Zm00001d026191_P001 | Maize | nucleus | 42.22 | 35.19 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 42.22 | 35.06 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 42.22 | 34.93 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 42.22 | 34.8 |
| Zm00001d002762_P001 | Maize | nucleus | 43.11 | 34.77 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 44.44 | 34.6 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 44.44 | 34.48 |
| Os02t0654700-01 | Rice | nucleus | 44.89 | 33.33 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 44.0 | 33.22 |
| Zm00001d017462_P001 | Maize | nucleus | 41.33 | 32.98 |
| OQU82076 | Sorghum | nucleus | 42.67 | 32.76 |
| CDY30489 | Canola | nucleus | 33.78 | 32.76 |
| CDX74692 | Canola | nucleus | 33.33 | 32.33 |
| CDY56473 | Canola | nucleus | 32.89 | 32.03 |
| CDY23459 | Canola | nucleus | 33.33 | 31.65 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 42.22 | 31.46 |
| EES05793 | Sorghum | nucleus | 43.11 | 31.19 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 45.78 | 31.12 |
| Os04t0546800-01 | Rice | nucleus | 42.22 | 29.87 |
| CDY40779 | Canola | nucleus | 24.0 | 29.67 |
| CDY16811 | Canola | nucleus | 25.33 | 28.36 |
| CDY23053 | Canola | nucleus | 24.89 | 28.28 |
| CDY60497 | Canola | nucleus | 25.78 | 28.16 |
| CDY14036 | Canola | nucleus | 23.56 | 28.04 |
| CDY02130 | Canola | nucleus | 24.44 | 27.78 |
| CDY64666 | Canola | nucleus | 25.78 | 27.49 |
| CDX87222 | Canola | nucleus | 24.0 | 26.87 |
| CDY08986 | Canola | nucleus | 24.89 | 26.42 |
| CDX71695 | Canola | nucleus | 25.78 | 26.36 |
| CDY05842 | Canola | nucleus | 25.78 | 26.36 |
| CDY42869 | Canola | nucleus | 24.44 | 25.11 |
| CDY35515 | Canola | nucleus | 17.78 | 25.0 |
| CDY67760 | Canola | nucleus | 24.44 | 24.44 |
| CDY38399 | Canola | nucleus | 26.67 | 23.26 |
| CDY64687 | Canola | nucleus | 28.89 | 22.65 |
| CDY41042 | Canola | nucleus | 29.33 | 22.53 |
| CDY25977 | Canola | nucleus | 29.33 | 22.3 |
| CDY64966 | Canola | nucleus | 26.22 | 22.18 |
| CDX76570 | Canola | nucleus | 27.56 | 22.14 |
| CDY02129 | Canola | nucleus | 23.56 | 21.12 |
| CDX77755 | Canola | nucleus | 28.89 | 20.97 |
| CDY23052 | Canola | nucleus | 23.56 | 20.7 |
| CDY27922 | Canola | nucleus | 16.44 | 19.47 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078JTP9 | UniProt:A0A078JTP9 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY68787 | ProteinID:CDY68787 | ProteinID:CDY68787.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00079836001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE55D3 | SEG:seg | : | : | : | : |
Description
BnaCnng60520DBnaCnng60520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTP9]
Coordinates
chrLK037983:+:3026..3925
Molecular Weight (calculated)
25091.2 Da
IEP (calculated)
7.346
GRAVY (calculated)
-0.665
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MMYGQSEVES DYALLESIRR HLLGGEAELR FAESIPSSCF TESWGDLPLK ENDSEDMLVY GLLNDPYDTS SPSSDLSCIT EFRPSDSPVA KAEPAESFAA
101: ATVEKQKAAT AKGKHYRGVR QRPWGKFAAE IRDPAKNGAR VWLGTFETAE DAAFAYDRAA FRMRGSRALL NFPLRVNSGE PDPVRITSKR SYTSSSSSSS
201: ENRKLKRRRK TENVPSEFQV KCEVV
101: ATVEKQKAAT AKGKHYRGVR QRPWGKFAAE IRDPAKNGAR VWLGTFETAE DAAFAYDRAA FRMRGSRALL NFPLRVNSGE PDPVRITSKR SYTSSSSSSS
201: ENRKLKRRRK TENVPSEFQV KCEVV
001: MYGQCNIESD YALLESITRH LLGGGGENEL RLNESTPSSC FTESWGGLPL KENDSEDMLV YGLLKDAFHF DTSSSDLSCL FDFPAVKVEP TENFTAMEEK
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
Arabidopsis Description
ERF2ERF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UCP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.