Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G414600.1 | Wheat | nucleus | 93.96 | 96.89 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 92.28 | 94.83 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 68.79 | 75.37 |
| Zm00001d017462_P001 | Maize | nucleus | 67.11 | 70.92 |
| EES05793 | Sorghum | nucleus | 69.13 | 66.24 |
| KRG92185 | Soybean | nucleus | 18.46 | 60.44 |
| GSMUA_Achr11P... | Banana | nucleus | 48.99 | 54.48 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 39.6 | 49.17 |
| Bra021047.1-P | Field mustard | nucleus | 29.53 | 48.62 |
| PGSC0003DMT400041331 | Potato | nucleus | 37.25 | 48.26 |
| Solyc03g093610.1.1 | Tomato | nucleus | 38.93 | 47.93 |
| PGSC0003DMT400027932 | Potato | nucleus | 39.6 | 47.77 |
| CDX76569 | Canola | nucleus | 28.52 | 47.22 |
| KRH04192 | Soybean | nucleus | 39.6 | 47.01 |
| Solyc05g052050.1.1 | Tomato | nucleus | 36.91 | 47.01 |
| PGSC0003DMT400005836 | Potato | nucleus | 31.21 | 46.73 |
| KRH57484 | Soybean | nucleus | 39.93 | 46.67 |
| KRH77323 | Soybean | nucleus | 42.62 | 46.35 |
| CDY38401 | Canola | nucleus | 35.23 | 46.26 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 43.29 | 45.74 |
| Solyc08g007230.1.1 | Tomato | nucleus | 30.54 | 45.73 |
| CDX77750 | Canola | nucleus | 33.89 | 45.5 |
| KRH28165 | Soybean | nucleus | 40.94 | 45.35 |
| Bra024954.1-P | Field mustard | nucleus | 32.89 | 44.95 |
| CDY33523 | Canola | nucleus | 32.55 | 44.91 |
| CDY43434 | Canola | nucleus | 34.23 | 44.74 |
| PGSC0003DMT400067534 | Potato | nucleus | 34.9 | 44.64 |
| CDY65883 | Canola | nucleus | 33.56 | 44.44 |
| Bra022115.1-P | Field mustard | nucleus | 33.89 | 44.1 |
| Bra032665.1-P | Field mustard | nucleus | 23.49 | 44.03 |
| CDY68787 | Canola | nucleus | 33.22 | 44.0 |
| KRH66522 | Soybean | nucleus | 28.52 | 43.59 |
| CDY28965 | Canola | nucleus | 33.56 | 43.48 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 31.21 | 43.46 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 29.87 | 43.41 |
| CDY38052 | Canola | nucleus | 24.16 | 43.37 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 47.99 | 43.2 |
| PGSC0003DMT400067535 | Potato | nucleus | 33.89 | 43.16 |
| Solyc08g078170.1.1 | Tomato | nucleus | 34.23 | 43.04 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 29.53 | 42.93 |
| CDY25978 | Canola | nucleus | 34.56 | 42.92 |
| Bra040159.1-P | Field mustard | nucleus | 34.56 | 42.92 |
| Bra021048.1-P | Field mustard | nucleus | 36.24 | 42.52 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 29.53 | 42.51 |
| AT4G17500.1 | Thale cress | nucleus | 37.92 | 42.16 |
| AT5G47220.1 | Thale cress | nucleus | 34.23 | 41.98 |
| CDY27923 | Canola | nucleus | 35.91 | 41.96 |
| Solyc08g078180.1.1 | Tomato | nucleus | 32.89 | 41.88 |
| Bra017495.1-P | Field mustard | nucleus | 34.23 | 41.63 |
| TraesCS1A01G141800.1 | Wheat | nucleus | 16.44 | 41.18 |
| KRH48809 | Soybean | nucleus | 20.81 | 40.0 |
| KRH66533 | Soybean | nucleus | 20.13 | 39.74 |
| TraesCS4A01G001400.1 | Wheat | nucleus | 17.11 | 38.93 |
| Bra004873.1-P | Field mustard | nucleus | 30.2 | 38.79 |
| CDX74692 | Canola | nucleus | 30.2 | 38.79 |
| CDY30489 | Canola | nucleus | 30.2 | 38.79 |
| CDY56473 | Canola | nucleus | 29.87 | 38.53 |
| AT2G44840.1 | Thale cress | nucleus | 29.19 | 38.5 |
| TraesCS4A01G416000.1 | Wheat | nucleus | 15.77 | 38.21 |
| KRH01076 | Soybean | nucleus | 25.84 | 38.12 |
| TraesCS5A01G065400.1 | Wheat | nucleus | 15.44 | 38.02 |
| KRH40171 | Soybean | nucleus | 25.84 | 37.93 |
| Bra037630.1-P | Field mustard | nucleus | 29.87 | 37.87 |
| CDY23459 | Canola | nucleus | 29.53 | 37.13 |
| KRH01077 | Soybean | nucleus | 26.17 | 36.97 |
| Solyc01g090310.2.1 | Tomato | nucleus | 22.15 | 36.67 |
| PGSC0003DMT400091474 | Potato | nucleus | 22.15 | 36.67 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 25.17 | 36.59 |
| KRH48815 | Soybean | nucleus | 28.86 | 35.83 |
| PGSC0003DMT400067020 | Potato | nucleus | 23.83 | 35.15 |
| PGSC0003DMT400091002 | Potato | nucleus | 25.5 | 34.86 |
| KRH01075 | Soybean | nucleus | 19.13 | 34.76 |
| Solyc01g090300.2.1 | Tomato | nucleus | 23.49 | 34.65 |
| KRH48811 | Soybean | nucleus | 23.83 | 34.63 |
| PGSC0003DMT400018085 | Potato | nucleus | 21.81 | 34.39 |
| KRH66532 | Soybean | nucleus | 25.5 | 34.08 |
| Solyc01g090320.2.1 | Tomato | nucleus | 21.14 | 33.87 |
| KRH66529 | Soybean | nucleus | 21.48 | 33.86 |
| Solyc05g050790.1.1 | Tomato | nucleus | 21.14 | 33.33 |
| PGSC0003DMT400066846 | Potato | nucleus | 24.16 | 32.43 |
| Solyc01g090370.1.1 | Tomato | nucleus | 23.83 | 32.13 |
| KRH66525 | Soybean | nucleus | 21.14 | 31.98 |
| Solyc01g090340.2.1 | Tomato | nucleus | 23.49 | 31.96 |
| PGSC0003DMT400066853 | Potato | nucleus | 18.46 | 31.79 |
| PGSC0003DMT400067013 | Potato | nucleus | 23.83 | 31.14 |
| KRH66526 | Soybean | nucleus | 20.47 | 30.96 |
| PGSC0003DMT400067018 | Potato | nucleus | 23.15 | 30.53 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 23.15 | 29.24 |
| PGSC0003DMT400097101 | Potato | nucleus | 21.14 | 28.77 |
| KRH66523 | Soybean | nucleus | 15.1 | 26.79 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 25.5 | 23.75 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 25.5 | 22.62 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 26.17 | 22.61 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF74 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2A01G417300 | EnsemblPlants:TraesCS2A01G417300.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:+:673326938..673327834
Molecular Weight (calculated)
31377.6 Da
IEP (calculated)
5.760
GRAVY (calculated)
-0.324
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLNPASEAL VLDSIRQHLM EDTAAAAAPV AEARRQRPAY CRSASFGSLV ADQWSESLPF RADDSDDMVV YGALRDAFSC GWLPDGSFAA VKPEPLLPSP
101: DSAYACDGPS CFGFLEPETP PATSPGEGEE EGAAFMGEAA AAVARGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTYD TAEDAAVAYD RAAYRMRGSR
201: ALLNFPLRIG SEIAAAHAAA AAAGDKRPSP EPATSDSSSS SSSSGSPKRR KRGEAAAASM AMALVPPPSQ LSRPAHAWYP AAPVEQVAMA PRAQQLVS
101: DSAYACDGPS CFGFLEPETP PATSPGEGEE EGAAFMGEAA AAVARGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTYD TAEDAAVAYD RAAYRMRGSR
201: ALLNFPLRIG SEIAAAHAAA AAAGDKRPSP EPATSDSSSS SSSSGSPKRR KRGEAAAASM AMALVPPPSQ LSRPAHAWYP AAPVEQVAMA PRAQQLVS
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.