Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400027932 | Potato | nucleus | 95.04 | 93.12 |
| Solyc05g052050.1.1 | Tomato | nucleus | 68.18 | 70.51 |
| GSMUA_Achr11P... | Banana | nucleus | 48.35 | 43.66 |
| Solyc02g077370.1.1 | Tomato | nucleus | 27.69 | 41.61 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 48.76 | 40.69 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 48.35 | 40.48 |
| Zm00001d026191_P001 | Maize | nucleus | 44.63 | 40.0 |
| Solyc08g078180.1.1 | Tomato | nucleus | 38.43 | 39.74 |
| Solyc08g007230.1.1 | Tomato | nucleus | 32.64 | 39.7 |
| Zm00001d002762_P001 | Maize | nucleus | 45.45 | 39.43 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 43.8 | 38.97 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 47.93 | 38.93 |
| Solyc03g005500.1.1 | Tomato | nucleus | 20.66 | 38.76 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 43.39 | 38.46 |
| Solyc08g078170.1.1 | Tomato | nucleus | 37.6 | 38.4 |
| Solyc01g090310.2.1 | Tomato | nucleus | 28.51 | 38.33 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 42.56 | 38.01 |
| Zm00001d017462_P001 | Maize | nucleus | 44.21 | 37.94 |
| OQU82076 | Sorghum | nucleus | 45.87 | 37.88 |
| Os02t0654700-01 | Rice | nucleus | 46.69 | 37.29 |
| Solyc09g089910.1.1 | Tomato | nucleus | 21.9 | 37.06 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 49.59 | 36.25 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 44.63 | 35.76 |
| EES05793 | Sorghum | nucleus | 45.87 | 35.69 |
| Os04t0546800-01 | Rice | nucleus | 45.87 | 34.91 |
| Solyc01g090300.2.1 | Tomato | nucleus | 28.93 | 34.65 |
| Solyc09g066350.1.1 | Tomato | nucleus | 21.9 | 33.97 |
| Solyc05g050790.1.1 | Tomato | nucleus | 26.45 | 33.86 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 28.1 | 33.17 |
| Solyc09g089920.1.1 | Tomato | nucleus | 20.66 | 32.89 |
| Solyc01g090320.2.1 | Tomato | nucleus | 25.21 | 32.8 |
| Solyc01g090340.2.1 | Tomato | nucleus | 28.93 | 31.96 |
| Solyc01g090370.1.1 | Tomato | nucleus | 27.69 | 30.32 |
| Solyc05g052030.1.1 | Tomato | nucleus | 21.49 | 25.87 |
| Solyc03g005510.1.1 | Tomato | nucleus, plastid | 18.18 | 25.14 |
| Solyc03g093540.1.1 | Tomato | nucleus | 23.14 | 24.56 |
| Solyc03g093550.1.1 | Tomato | nucleus | 23.14 | 23.24 |
| Solyc03g093560.1.1 | Tomato | nucleus | 22.73 | 22.54 |
| Solyc08g078190.1.1 | Tomato | nucleus | 27.27 | 20.5 |
| Solyc05g052040.1.1 | Tomato | nucleus | 27.69 | 18.36 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009835 | GO:GO:0009873 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K4BIN7 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF76 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc03g093610.1 | EnsemblPlants:Solyc03g093610.1.1 |
| UniParc:UPI0001D64C47 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:55030176..55030904
Molecular Weight (calculated)
26761.8 Da
IEP (calculated)
8.039
GRAVY (calculated)
-0.433
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQLPTSTEL TFFPAEFPVY CRSSSFSSLM PCLTESWGDL PLKVNDSEDM VIYGFLQDAF SIGWTPSNLT SEEVKLEPRE EIEPAMSTSV SPPTVAPAAL
101: QPKGRHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTYESA EEAALAYDKA AFRMRGTKAL LNFPHRIGLN EPEPVRVTVK RRLSESASSS VSSASESGSP
201: KRRRKGVAAK QAELEVESRG PNVMKVGCQM EQFPVGEQLL VS
101: QPKGRHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTYESA EEAALAYDKA AFRMRGTKAL LNFPHRIGLN EPEPVRVTVK RRLSESASSS VSSASESGSP
201: KRRRKGVAAK QAELEVESRG PNVMKVGCQM EQFPVGEQLL VS
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.