Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067534 | Potato | nucleus | 89.03 | 90.56 |
| Solyc08g078180.1.1 | Tomato | nucleus | 51.05 | 51.71 |
| Solyc08g007230.1.1 | Tomato | nucleus | 43.04 | 51.26 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 37.55 | 43.0 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 38.82 | 42.99 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 37.13 | 42.93 |
| Solyc05g052050.1.1 | Tomato | nucleus | 41.35 | 41.88 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 35.87 | 41.46 |
| Solyc03g005500.1.1 | Tomato | nucleus | 20.68 | 37.98 |
| Solyc01g090310.2.1 | Tomato | nucleus | 28.69 | 37.78 |
| Solyc09g089910.1.1 | Tomato | nucleus | 22.78 | 37.76 |
| Solyc03g093610.1.1 | Tomato | nucleus | 38.4 | 37.6 |
| Solyc01g090320.2.1 | Tomato | nucleus | 28.69 | 36.56 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 30.8 | 35.61 |
| Zm00001d026191_P001 | Maize | nucleus | 40.08 | 35.19 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 42.62 | 34.95 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 42.62 | 34.83 |
| GSMUA_Achr11P... | Banana | nucleus | 38.82 | 34.33 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 43.04 | 34.23 |
| Solyc09g089920.1.1 | Tomato | nucleus | 21.94 | 34.21 |
| Solyc02g077370.1.1 | Tomato | nucleus | 23.21 | 34.16 |
| Solyc01g090300.2.1 | Tomato | nucleus | 28.69 | 33.66 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 38.4 | 33.58 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 38.4 | 33.46 |
| Zm00001d002762_P001 | Maize | nucleus | 39.24 | 33.33 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 38.4 | 33.33 |
| Solyc09g066350.1.1 | Tomato | nucleus | 21.52 | 32.69 |
| OQU82076 | Sorghum | nucleus | 39.24 | 31.74 |
| Zm00001d017462_P001 | Maize | nucleus | 37.55 | 31.56 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 39.66 | 31.13 |
| EES05793 | Sorghum | nucleus | 40.08 | 30.55 |
| Solyc05g052030.1.1 | Tomato | nucleus | 25.74 | 30.35 |
| Solyc01g090340.2.1 | Tomato | nucleus | 27.85 | 30.14 |
| Os02t0654700-01 | Rice | nucleus | 37.97 | 29.7 |
| Os04t0546800-01 | Rice | nucleus | 39.24 | 29.25 |
| Solyc05g050790.1.1 | Tomato | nucleus | 23.21 | 29.1 |
| Solyc01g090370.1.1 | Tomato | nucleus | 27.0 | 28.96 |
| Solyc03g093540.1.1 | Tomato | nucleus | 27.43 | 28.51 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 38.4 | 27.49 |
| Solyc03g093550.1.1 | Tomato | nucleus | 27.43 | 26.97 |
| Solyc03g005510.1.1 | Tomato | nucleus, plastid | 18.57 | 25.14 |
| Solyc03g093560.1.1 | Tomato | nucleus | 25.74 | 25.0 |
| Solyc08g078190.1.1 | Tomato | nucleus | 28.27 | 20.81 |
| Solyc05g052040.1.1 | Tomato | nucleus | 28.27 | 18.36 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K4CNH6 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc08g078170.1 | EnsemblPlants:Solyc08g078170.1.1 | UniParc:UPI000276C8BD | SEG:seg | : |
Description
No Description!
Coordinates
chr8:-:61997031..61997744
Molecular Weight (calculated)
26769.9 Da
IEP (calculated)
4.782
GRAVY (calculated)
-0.722
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MFENIDFEND YAFLQSIKLQ LLEDWEWENP LTSSDNSIST YSRNNSIESN TFSNEFDYST DNLSNDFDCL TDKFLSDLIN DNGFGYGSDP VIPNVKSEPE
101: IWNFAEFAAA AEVRVEPPAQ SVVTAPPQRL PTARHYRGVR QRPWGKFAAE IRDPAKNGQR VWLGTYETAE DAAFAYDKAA FRMRGSRAML NFPLRVNSGE
201: PEPIRVRSKK SSMSPECSSS SSDNAPGKRR KKVPQAV
101: IWNFAEFAAA AEVRVEPPAQ SVVTAPPQRL PTARHYRGVR QRPWGKFAAE IRDPAKNGQR VWLGTYETAE DAAFAYDKAA FRMRGSRAML NFPLRVNSGE
201: PEPIRVRSKK SSMSPECSSS SSDNAPGKRR KKVPQAV
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.