Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g078170.1.1 | Tomato | nucleus | 90.56 | 89.03 |
| PGSC0003DMT400067535 | Potato | nucleus | 54.08 | 53.85 |
| PGSC0003DMT400005836 | Potato | nucleus | 45.06 | 52.76 |
| PGSC0003DMT400041331 | Potato | nucleus | 43.35 | 43.91 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 38.2 | 43.0 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 37.77 | 42.93 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 39.06 | 42.52 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 37.34 | 42.44 |
| PGSC0003DMT400091474 | Potato | nucleus | 30.47 | 39.44 |
| PGSC0003DMT400034871 | Potato | nucleus | 20.6 | 38.4 |
| PGSC0003DMT400027932 | Potato | nucleus | 39.91 | 37.65 |
| PGSC0003DMT400044383 | Potato | nucleus | 22.32 | 37.41 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 32.62 | 37.07 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 43.78 | 35.29 |
| Zm00001d026191_P001 | Maize | nucleus | 40.77 | 35.19 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 43.78 | 35.17 |
| PGSC0003DMT400067020 | Potato | nucleus | 30.47 | 35.15 |
| GSMUA_Achr11P... | Banana | nucleus | 40.34 | 35.07 |
| PGSC0003DMT400097075 | Potato | nucleus | 21.89 | 34.93 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 44.64 | 34.9 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 39.91 | 34.32 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 39.91 | 34.07 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 39.48 | 33.82 |
| Zm00001d002762_P001 | Maize | nucleus | 39.91 | 33.33 |
| PGSC0003DMT400091002 | Potato | nucleus | 30.9 | 33.03 |
| PGSC0003DMT400026678 | Potato | nucleus | 21.89 | 32.48 |
| Zm00001d017462_P001 | Maize | nucleus | 38.63 | 31.91 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 41.2 | 31.79 |
| OQU82076 | Sorghum | nucleus | 39.91 | 31.74 |
| PGSC0003DMT400067018 | Potato | nucleus | 30.04 | 30.97 |
| EES05793 | Sorghum | nucleus | 41.2 | 30.87 |
| PGSC0003DMT400018085 | Potato | nucleus | 24.89 | 30.69 |
| PGSC0003DMT400066846 | Potato | nucleus | 29.18 | 30.63 |
| PGSC0003DMT400027849 | Potato | nucleus | 23.61 | 30.22 |
| PGSC0003DMT400097101 | Potato | nucleus | 28.33 | 30.14 |
| PGSC0003DMT400041328 | Potato | nucleus | 26.61 | 30.1 |
| PGSC0003DMT400066853 | Potato | nucleus | 22.32 | 30.06 |
| Os02t0654700-01 | Rice | nucleus | 39.06 | 30.03 |
| Os04t0546800-01 | Rice | nucleus | 39.91 | 29.25 |
| PGSC0003DMT400067013 | Potato | nucleus | 27.9 | 28.51 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 39.91 | 28.1 |
| PGSC0003DMT400034984 | Potato | nucleus | 18.88 | 28.03 |
| PGSC0003DMT400090475 | Potato | nucleus | 27.04 | 25.71 |
| PGSC0003DMT400086995 | Potato | nucleus | 26.61 | 25.31 |
| PGSC0003DMT400027937 | Potato | nucleus | 26.61 | 24.51 |
| PGSC0003DMT400041327 | Potato | nucleus | 27.04 | 21.28 |
| PGSC0003DMT400067472 | Potato | nucleus | 24.03 | 20.14 |
Protein Annotations
| EntrezGene:102599320 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M1CHG4 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400026260 | PGSC:PGSC0003DMG400026260 | EnsemblPlants:PGSC0003DMT400067534 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295166A |
| RefSeq:XP_006359238.1 | SEG:seg | : | : | : | : |
Description
AP2 domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400026260]
Coordinates
chr8:-:51283797..51285061
Molecular Weight (calculated)
26255.3 Da
IEP (calculated)
4.770
GRAVY (calculated)
-0.746
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MFENIDFEND YALLESIKLQ LLEDWEWENP VTSSDNSTST YSRNNSIESN NSLSNDFDYS TDKFLSDLLN DNDVGYGSDP VIPNVKSEPE IWNFAEFAAA
101: TQYTTAEVRV EPPPQLVVTA PPQTLPTARH YRGVRQRPWG KFAAEIRDPA KNGQRVWLGT YETAEDAAFA YDKAAFRMRG SRAMLNFPLR INSGEPEPIR
201: VRSKKSSMSP ECSSSSSSDN APGKRRKKVP QVV
101: TQYTTAEVRV EPPPQLVVTA PPQTLPTARH YRGVRQRPWG KFAAEIRDPA KNGQRVWLGT YETAEDAAFA YDKAAFRMRG SRAMLNFPLR INSGEPEPIR
201: VRSKKSSMSP ECSSSSSSDN APGKRRKKVP QVV
001: MYGQCNIESD YALLESITRH LLGGGGENEL RLNESTPSSC FTESWGGLPL KENDSEDMLV YGLLKDAFHF DTSSSDLSCL FDFPAVKVEP TENFTAMEEK
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
Arabidopsis Description
ERF2ERF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UCP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.