Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g005510.1.1 | Tomato | nucleus, plastid | 97.45 | 87.43 |
| PGSC0003DMT400097075 | Potato | nucleus | 56.69 | 60.96 |
| KRH12208 | Soybean | nucleus | 43.31 | 56.2 |
| KRH37227 | Soybean | nucleus | 43.31 | 55.74 |
| VIT_05s0049g00500.t01 | Wine grape | nucleus | 51.59 | 53.29 |
| CDX85071 | Canola | nucleus | 46.5 | 52.9 |
| Bra014925.1-P | Field mustard | nucleus | 46.5 | 52.52 |
| AT3G23230.1 | Thale cress | nucleus | 46.5 | 52.52 |
| CDX77537 | Canola | nucleus | 46.5 | 52.52 |
| KRG92310 | Soybean | nucleus | 44.59 | 52.24 |
| CDY35516 | Canola | nucleus | 45.86 | 52.17 |
| Bra023748.1-P | Field mustard | nucleus | 45.86 | 52.17 |
| PGSC0003DMT400034871 | Potato | nucleus | 40.13 | 50.4 |
| KRH12207 | Soybean | nucleus | 42.04 | 50.0 |
| KRH34484 | Soybean | nucleus | 44.59 | 49.65 |
| KRH37228 | Soybean | nucleus | 43.31 | 49.63 |
| KRH37226 | Soybean | nucleus | 36.94 | 49.15 |
| KRH31710 | Soybean | nucleus | 42.68 | 48.91 |
| PGSC0003DMT400044383 | Potato | nucleus | 42.04 | 47.48 |
| PGSC0003DMT400026678 | Potato | nucleus | 40.76 | 40.76 |
| CDY08986 | Canola | nucleus | 45.86 | 33.96 |
| PGSC0003DMT400027849 | Potato | nucleus | 29.3 | 25.27 |
| PGSC0003DMT400018085 | Potato | nucleus | 28.66 | 23.81 |
| PGSC0003DMT400091474 | Potato | nucleus | 26.75 | 23.33 |
| PGSC0003DMT400005836 | Potato | nucleus | 28.66 | 22.61 |
| PGSC0003DMT400041328 | Potato | nucleus | 28.66 | 21.84 |
| PGSC0003DMT400067020 | Potato | nucleus | 28.03 | 21.78 |
| PGSC0003DMT400090475 | Potato | nucleus | 33.12 | 21.22 |
| PGSC0003DMT400086995 | Potato | nucleus | 32.48 | 20.82 |
| PGSC0003DMT400066853 | Potato | nucleus | 22.93 | 20.81 |
| PGSC0003DMT400067018 | Potato | nucleus | 29.94 | 20.8 |
| PGSC0003DMT400027937 | Potato | nucleus | 33.12 | 20.55 |
| PGSC0003DMT400091002 | Potato | nucleus | 27.39 | 19.72 |
| PGSC0003DMT400067013 | Potato | nucleus | 28.03 | 19.3 |
| PGSC0003DMT400067535 | Potato | nucleus | 28.66 | 19.23 |
| PGSC0003DMT400067534 | Potato | nucleus | 28.03 | 18.88 |
| PGSC0003DMT400097101 | Potato | nucleus | 26.11 | 18.72 |
| PGSC0003DMT400041331 | Potato | nucleus | 27.39 | 18.7 |
| PGSC0003DMT400066846 | Potato | nucleus | 26.11 | 18.47 |
| PGSC0003DMT400027932 | Potato | nucleus | 28.03 | 17.81 |
| PGSC0003DMT400067472 | Potato | nucleus | 30.57 | 17.27 |
| PGSC0003DMT400041327 | Potato | nucleus | 32.48 | 17.23 |
Protein Annotations
| EntrezGene:107062261 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M1B1M3 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400013450 | PGSC:PGSC0003DMG400013450 | EnsemblPlants:PGSC0003DMT400034984 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF68 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295BDA6 |
| RefSeq:XP_015168164.1 | SEG:seg | : | : | : | : |
Description
AP2/ERF domain-containing transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400013450]
Coordinates
chr3:-:594787..595428
Molecular Weight (calculated)
17969.0 Da
IEP (calculated)
9.188
GRAVY (calculated)
-0.921
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSSSSSSS KGKKIIQLEK ENGKDSNDLI KYRGVRKRTW GKFAAEIRDP TRQGARQWLG TFDTAEDAAR AYDKAAFNLR GHLATLNFPN EYYSKLNDPH
101: YYNYRTSLNV NVPSRSLERG ISSIGHQDKE IIEFEYLDDS VLEELLGAED PKKMIRK
101: YYNYRTSLNV NVPSRSLERG ISSIGHQDKE IIEFEYLDDS VLEELLGAED PKKMIRK
001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
Arabidopsis Description
ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.