Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g007230.1.1 | Tomato | nucleus | 91.96 | 91.96 |
| PGSC0003DMT400067535 | Potato | nucleus | 61.31 | 52.14 |
| PGSC0003DMT400067534 | Potato | nucleus | 52.76 | 45.06 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 44.72 | 43.0 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 45.23 | 42.06 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 43.22 | 41.95 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 42.71 | 41.46 |
| PGSC0003DMT400044383 | Potato | nucleus | 27.64 | 39.57 |
| PGSC0003DMT400034871 | Potato | nucleus | 24.12 | 38.4 |
| PGSC0003DMT400091474 | Potato | nucleus | 34.67 | 38.33 |
| PGSC0003DMT400041331 | Potato | nucleus | 41.71 | 36.09 |
| PGSC0003DMT400097075 | Potato | nucleus | 26.13 | 35.62 |
| PGSC0003DMT400067020 | Potato | nucleus | 35.18 | 34.65 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 35.18 | 34.15 |
| PGSC0003DMT400027932 | Potato | nucleus | 41.71 | 33.6 |
| Zm00001d026191_P001 | Maize | nucleus | 45.23 | 33.33 |
| Zm00001d002762_P001 | Maize | nucleus | 45.73 | 32.62 |
| PGSC0003DMT400026678 | Potato | nucleus | 25.13 | 31.85 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 46.23 | 31.83 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 46.23 | 31.72 |
| GSMUA_Achr11P... | Banana | nucleus | 42.71 | 31.72 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 43.22 | 31.62 |
| PGSC0003DMT400018085 | Potato | nucleus | 29.65 | 31.22 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 46.73 | 31.21 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 42.71 | 31.14 |
| OQU82076 | Sorghum | nucleus | 45.73 | 31.06 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 42.21 | 31.0 |
| PGSC0003DMT400091002 | Potato | nucleus | 33.67 | 30.73 |
| PGSC0003DMT400066846 | Potato | nucleus | 34.17 | 30.63 |
| Zm00001d017462_P001 | Maize | nucleus | 42.21 | 29.79 |
| PGSC0003DMT400067018 | Potato | nucleus | 33.67 | 29.65 |
| PGSC0003DMT400097101 | Potato | nucleus | 32.16 | 29.22 |
| PGSC0003DMT400034984 | Potato | nucleus | 22.61 | 28.66 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 43.22 | 28.48 |
| EES05793 | Sorghum | nucleus | 44.22 | 28.3 |
| Os02t0654700-01 | Rice | nucleus | 42.71 | 28.05 |
| Os04t0546800-01 | Rice | nucleus | 44.72 | 27.99 |
| PGSC0003DMT400066853 | Potato | nucleus | 24.12 | 27.75 |
| PGSC0003DMT400027849 | Potato | nucleus | 25.13 | 27.47 |
| PGSC0003DMT400067013 | Potato | nucleus | 31.16 | 27.19 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 45.23 | 27.19 |
| PGSC0003DMT400041328 | Potato | nucleus | 27.14 | 26.21 |
| PGSC0003DMT400090475 | Potato | nucleus | 29.65 | 24.08 |
| PGSC0003DMT400086995 | Potato | nucleus | 29.15 | 23.67 |
| PGSC0003DMT400027937 | Potato | nucleus | 29.65 | 23.32 |
| PGSC0003DMT400041327 | Potato | nucleus | 30.15 | 20.27 |
| PGSC0003DMT400067472 | Potato | nucleus | 25.63 | 18.35 |
Protein Annotations
| EntrezGene:102595148 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M0ZQG8 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400002272 | PGSC:PGSC0003DMG400002272 | EnsemblPlants:PGSC0003DMT400005836 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029642CB |
| RefSeq:XP_006358332.1 | SEG:seg | : | : | : | : |
Description
Transcription factor AP2-EREBP [Source:PGSC_GENE;Acc:PGSC0003DMG400002272]
Coordinates
chr8:+:893209..894200
Molecular Weight (calculated)
22160.3 Da
IEP (calculated)
8.942
GRAVY (calculated)
-0.430
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFENSEFMN DFELLESIRQ HLLEDWDSPV TTVLKPSVKI EPEVIVSSPE MYDFTGFTAP ATETAVAEVK LEVKVKTAAV KRTPAALKSM HYRGVRQRPW
101: GKFAAEIRDP AKNGARVWLG TYETAEDAAL AYDKAAYRIR GSRALLNFPL RVNSGEPEPV RVGSKRSLST TSSESSSSSS SEDASMMTKR TKKVCQLYT
101: GKFAAEIRDP AKNGARVWLG TYETAEDAAL AYDKAAYRIR GSRALLNFPL RVNSGEPEPV RVGSKRSLST TSSESSSSSS SEDASMMTKR TKKVCQLYT
001: MYGQCNIESD YALLESITRH LLGGGGENEL RLNESTPSSC FTESWGGLPL KENDSEDMLV YGLLKDAFHF DTSSSDLSCL FDFPAVKVEP TENFTAMEEK
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
Arabidopsis Description
ERF2ERF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UCP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.