Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G225500.1 | Wheat | nucleus | 95.22 | 94.87 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 93.38 | 93.73 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 92.28 | 83.11 |
| Os02t0654700-01 | Rice | nucleus | 82.35 | 73.93 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 75.37 | 68.79 |
| KRG92185 | Soybean | nucleus | 19.49 | 58.24 |
| GSMUA_Achr11P... | Banana | nucleus | 49.63 | 50.37 |
| Bra021047.1-P | Field mustard | nucleus | 31.99 | 48.07 |
| CDX76569 | Canola | nucleus | 30.88 | 46.67 |
| KRH04192 | Soybean | nucleus | 41.54 | 45.02 |
| CDY38401 | Canola | nucleus | 37.5 | 44.93 |
| KRH57484 | Soybean | nucleus | 41.91 | 44.71 |
| PGSC0003DMT400041331 | Potato | nucleus | 37.5 | 44.35 |
| Solyc03g093610.1.1 | Tomato | nucleus | 38.97 | 43.8 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 38.6 | 43.75 |
| PGSC0003DMT400027932 | Potato | nucleus | 39.71 | 43.72 |
| CDY33523 | Canola | nucleus | 34.56 | 43.52 |
| CDY43434 | Canola | nucleus | 36.4 | 43.42 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 44.85 | 43.26 |
| PGSC0003DMT400005836 | Potato | nucleus | 31.62 | 43.22 |
| CDY65883 | Canola | nucleus | 35.66 | 43.11 |
| CDX77750 | Canola | nucleus | 34.93 | 42.79 |
| Solyc05g052050.1.1 | Tomato | nucleus | 36.76 | 42.73 |
| KRH77323 | Soybean | nucleus | 43.01 | 42.7 |
| KRH66522 | Soybean | nucleus | 30.51 | 42.56 |
| KRH28165 | Soybean | nucleus | 41.91 | 42.38 |
| CDY68787 | Canola | nucleus | 34.93 | 42.22 |
| Solyc08g007230.1.1 | Tomato | nucleus | 30.88 | 42.21 |
| Bra024954.1-P | Field mustard | nucleus | 33.82 | 42.2 |
| Bra022115.1-P | Field mustard | nucleus | 35.29 | 41.92 |
| CDY28965 | Canola | nucleus | 35.29 | 41.74 |
| Bra040159.1-P | Field mustard | nucleus | 36.76 | 41.67 |
| CDY25978 | Canola | nucleus | 36.76 | 41.67 |
| Bra021048.1-P | Field mustard | nucleus | 38.6 | 41.34 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 32.35 | 41.12 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 31.25 | 41.06 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 30.88 | 40.98 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 30.88 | 40.98 |
| CDY27923 | Canola | nucleus | 38.24 | 40.78 |
| Bra017495.1-P | Field mustard | nucleus | 36.4 | 40.41 |
| Bra032665.1-P | Field mustard | nucleus | 23.53 | 40.25 |
| AT5G47220.1 | Thale cress | nucleus | 35.66 | 39.92 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 48.53 | 39.88 |
| PGSC0003DMT400067534 | Potato | nucleus | 33.82 | 39.48 |
| AT4G17500.1 | Thale cress | nucleus | 38.6 | 39.18 |
| CDY38052 | Canola | nucleus | 23.9 | 39.16 |
| PGSC0003DMT400067535 | Potato | nucleus | 33.46 | 38.89 |
| Solyc08g078170.1.1 | Tomato | nucleus | 33.46 | 38.4 |
| KRH48809 | Soybean | nucleus | 21.69 | 38.06 |
| Solyc08g078180.1.1 | Tomato | nucleus | 32.72 | 38.03 |
| TraesCS1A01G141800.1 | Wheat | nucleus | 16.54 | 37.82 |
| KRH01076 | Soybean | nucleus | 27.21 | 36.63 |
| KRH66533 | Soybean | nucleus | 20.22 | 36.42 |
| KRH40171 | Soybean | nucleus | 26.84 | 35.96 |
| TraesCS4A01G001400.1 | Wheat | nucleus | 17.28 | 35.88 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 26.84 | 35.61 |
| KRH01077 | Soybean | nucleus | 27.57 | 35.55 |
| TraesCS5A01G065400.1 | Wheat | nucleus | 15.81 | 35.54 |
| KRH48815 | Soybean | nucleus | 30.88 | 35.0 |
| TraesCS4A01G416000.1 | Wheat | nucleus | 15.81 | 34.96 |
| AT2G44840.1 | Thale cress | nucleus | 29.04 | 34.96 |
| CDY30489 | Canola | nucleus | 29.78 | 34.91 |
| CDX74692 | Canola | nucleus | 29.04 | 34.05 |
| Bra004873.1-P | Field mustard | nucleus | 29.04 | 34.05 |
| Bra037630.1-P | Field mustard | nucleus | 29.41 | 34.04 |
| PGSC0003DMT400091474 | Potato | nucleus | 22.43 | 33.89 |
| CDY56473 | Canola | nucleus | 28.68 | 33.77 |
| KRH48811 | Soybean | nucleus | 25.37 | 33.66 |
| KRH01075 | Soybean | nucleus | 20.22 | 33.54 |
| KRH66529 | Soybean | nucleus | 23.16 | 33.33 |
| CDY23459 | Canola | nucleus | 29.04 | 33.33 |
| Solyc01g090310.2.1 | Tomato | nucleus | 22.06 | 33.33 |
| KRH66532 | Soybean | nucleus | 26.84 | 32.74 |
| Solyc01g090320.2.1 | Tomato | nucleus | 21.69 | 31.72 |
| KRH66525 | Soybean | nucleus | 22.79 | 31.47 |
| PGSC0003DMT400067020 | Potato | nucleus | 23.16 | 31.19 |
| Solyc01g090300.2.1 | Tomato | nucleus | 22.79 | 30.69 |
| PGSC0003DMT400091002 | Potato | nucleus | 24.26 | 30.28 |
| PGSC0003DMT400066846 | Potato | nucleus | 24.63 | 30.18 |
| PGSC0003DMT400018085 | Potato | nucleus | 20.96 | 30.16 |
| PGSC0003DMT400066853 | Potato | nucleus | 18.75 | 29.48 |
| Solyc01g090340.2.1 | Tomato | nucleus | 23.53 | 29.22 |
| Solyc05g050790.1.1 | Tomato | nucleus | 20.22 | 29.1 |
| Solyc01g090370.1.1 | Tomato | nucleus | 23.16 | 28.51 |
| PGSC0003DMT400067018 | Potato | nucleus | 23.53 | 28.32 |
| PGSC0003DMT400067013 | Potato | nucleus | 23.53 | 28.07 |
| KRH66526 | Soybean | nucleus | 20.22 | 27.92 |
| PGSC0003DMT400097101 | Potato | nucleus | 22.43 | 27.85 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 23.53 | 27.12 |
| KRH66523 | Soybean | nucleus | 14.71 | 23.81 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 27.57 | 23.44 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 29.41 | 23.19 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 27.94 | 22.62 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF74 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6A01G243300 | EnsemblPlants:TraesCS6A01G243300.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:-:454711792..454712610
Molecular Weight (calculated)
28479.4 Da
IEP (calculated)
6.026
GRAVY (calculated)
-0.257
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLNPASEA AALDSIRQQL LEEPARPAYC RSASFGSLVA DQWSESLPFR PNDADDMVVY GALRDAFSCG WLPDGSFAAV KPEPLPSPDG SYDGSCLGSF
101: LAPPAPGPDA PWAEEEAEVA AAASRGKHFR GVRQRPWGKF AAEIRDPAKN GARVWLGTFD SAEDAAVAYD RAAYRMRGSR ALLNFPLRIG SEIAAAAAAA
201: GQKRPSPQPA SPDSSSPSCS APGSSKRRKR GEAAAASMAM ALVPPPPAQA PVQLTLPAQP WLAAGAVQQL VS
101: LAPPAPGPDA PWAEEEAEVA AAASRGKHFR GVRQRPWGKF AAEIRDPAKN GARVWLGTFD SAEDAAVAYD RAAYRMRGSR ALLNFPLRIG SEIAAAAAAA
201: GQKRPSPQPA SPDSSSPSCS APGSSKRRKR GEAAAASMAM ALVPPPPAQA PVQLTLPAQP WLAAGAVQQL VS
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.