Factsheet for Bra021047.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76569	Canola	nucleus	96.69	97.22
Bra021048.1-P	Field mustard	nucleus	100.0	71.26
Bra040159.1-P	Field mustard	nucleus	80.66	60.83
AT4G17500.1	Thale cress	nucleus	83.43	56.34
Bra024954.1-P	Field mustard	nucleus	59.67	49.54
Bra022115.1-P	Field mustard	nucleus	60.77	48.03
Bra017495.1-P	Field mustard	nucleus	63.54	46.94
KRH04192	Soybean	nucleus	59.12	42.63
KRH57484	Soybean	nucleus	59.12	41.96
VIT_02s0234g00130.t01	Wine grape	nucleus	62.43	40.07
Bra014925.1-P	Field mustard	nucleus	30.39	39.57
Bra027493.1-P	Field mustard	nucleus	28.18	38.64
Bra023748.1-P	Field mustard	nucleus	28.73	37.68
Bra015310.1-P	Field mustard	nucleus	27.62	37.31
KRH77323	Soybean	nucleus	56.35	37.23
Bra032512.1-P	Field mustard	nucleus	28.18	36.96
KRH28165	Soybean	nucleus	54.7	36.8
Bra014924.1-P	Field mustard	nucleus	26.52	34.78
GSMUA_Achr11P...	Banana	nucleus	49.17	33.21
Bra032665.1-P	Field mustard	nucleus	28.73	32.7
GSMUA_Achr1P00490_001	Banana	nucleus	37.02	32.68
Zm00001d026191_P001	Maize	nucleus	48.07	32.22
TraesCS6A01G243300.1	Wheat	nucleus	48.07	31.99
Zm00001d002762_P001	Maize	nucleus	49.17	31.9
TraesCS6B01G281000.1	Wheat	nucleus	46.96	31.37
TraesCS6D01G225500.1	Wheat	nucleus	46.96	31.14
TraesCS2D01G414600.1	Wheat	nucleus	49.17	30.8
TraesCS2B01G436300.1	Wheat	nucleus	48.62	30.34
Bra004873.1-P	Field mustard	nucleus	38.67	30.17
OQU82076	Sorghum	nucleus	48.62	30.03
TraesCS2A01G417300.1	Wheat	nucleus	48.62	29.53
Zm00001d017462_P001	Maize	nucleus	45.86	29.43
Bra037630.1-P	Field mustard	nucleus	38.12	29.36
HORVU6Hr1G062380.3	Barley	nucleus	48.07	28.81
GSMUA_Achr5P21050_001	Banana	nucleus	50.83	27.79
Os02t0654700-01	Rice	nucleus	46.41	27.72
Os04t0546800-01	Rice	nucleus	48.62	27.67
EES05793	Sorghum	nucleus	47.51	27.65
Bra028690.1-P	Field mustard	nucleus	27.62	27.47
Bra012939.1-P	Field mustard	nucleus	26.52	24.24
Bra035919.1-P	Field mustard	nucleus	27.07	24.14
Bra009250.1-P	Field mustard	nucleus	27.62	23.7
Bra035732.1-P	Field mustard	nucleus	28.18	23.5
Bra040158.1-P	Field mustard	nucleus	32.04	21.8
Bra029319.1-P	Field mustard	nucleus	26.52	21.52
Bra017493.1-P	Field mustard	nucleus	34.81	21.43
Bra024953.1-P	Field mustard	nucleus	34.25	21.02
Bra021049.1-P	Field mustard	nucleus	29.28	18.86
Bra012938.1-P	Field mustard	nucleus	26.52	18.6
Bra023749.1-P	Field mustard	nucleus	9.39	14.17

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra021047	EnsemblPlants:Bra021047.1
EnsemblPlants:Bra021047.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4DX01	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF79	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000254709C	SEG:seg

Description

AT4G17500 (E=2e-049) ATERF-1 | ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor

Coordinates

chrA08:+:10235488..10236033

Molecular Weight (calculated)

19958.5 Da

IEP (calculated)

10.389

GRAVY (calculated)

-0.683

Length

181 amino acids

Sequence
(BLAST)

001: MLVYGILNDA FHGGWEPSSS SSDEDQSSIF PKVKTENFTV VDHAPAKKAS PVKAPEKGKH YRGVRQRPWG KFAAEIRDPA KNGARVWLGT FETAEDAALA
101: YDRAAFRMRG SRALLNFPLR VNSGEPDPVR VKSKRGSSSE NENGASKRRR TVASGGQGTD MGLKVKCEVV EVRRDDHLFV L

Best Arabidopsis Sequence Match ( AT4G17500.1 )
(BLAST)

001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL

Arabidopsis Description

ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.