Factsheet for Bra021049.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76570	Canola	nucleus	97.86	98.21
CDY27922	Canola	nucleus	65.48	96.84
Bra040158.1-P	Field mustard	nucleus	76.16	80.45
AT4G17490.1	Thale cress	nucleus	74.02	73.76
Bra017493.1-P	Field mustard	nucleus	58.72	56.12
Bra024953.1-P	Field mustard	nucleus	56.94	54.24
Bra035732.1-P	Field mustard	nucleus	32.38	41.94
VIT_16s0013g01110.t01	Wine grape	nucleus	35.59	41.49
VIT_16s0013g01120.t01	Wine grape	nucleus, plastid	35.23	40.91
VIT_16s0013g00900.t01	Wine grape	nucleus	33.1	40.61
VIT_16s0013g01000.t01	Wine grape	nucleus	36.65	38.43
GSMUA_Achr1P00480_001	Banana	nucleus	26.33	37.76
Solyc03g093550.1.1	Tomato	nucleus	32.03	37.34
Bra023748.1-P	Field mustard	nucleus	18.15	36.96
VIT_16s0013g01030.t01	Wine grape	cytosol	14.59	36.94
VIT_16s0013g01050.t01	Wine grape	nucleus	36.3	36.82
VIT_16s0013g01060.t01	Wine grape	nucleus	36.3	36.82
Bra014925.1-P	Field mustard	nucleus	18.15	36.69
Bra027493.1-P	Field mustard	nucleus	17.08	36.36
VIT_16s0013g01070.t01	Wine grape	nucleus	35.59	36.36
VIT_16s0013g00990.t01	Wine grape	nucleus	35.94	36.33
VIT_16s0013g00950.t01	Wine grape	nucleus	35.59	36.1
Solyc03g093560.1.1	Tomato	nucleus	31.32	36.07
VIT_16s0013g00980.t01	Wine grape	nucleus	35.23	36.0
PGSC0003DMT400086995	Potato	nucleus	31.32	35.92
Solyc03g093540.1.1	Tomato	nucleus	28.83	35.53
GSMUA_Achr7P06910_001	Banana	nucleus	29.54	35.17
PGSC0003DMT400090475	Potato	nucleus	30.61	35.1
PGSC0003DMT400027937	Potato	nucleus	31.32	34.78
VIT_16s0013g01090.t01	Wine grape	nucleus	32.38	34.47
Bra015310.1-P	Field mustard	nucleus	16.37	34.33
KRG90129	Soybean	nucleus	32.03	33.83
GSMUA_Achr11P...	Banana	nucleus	22.78	33.68
TraesCS1A01G218100.1	Wheat	nucleus	28.11	33.47
PGSC0003DMT400041327	Potato	nucleus	35.23	33.45
Bra014924.1-P	Field mustard	nucleus	16.37	33.33
HORVU1Hr1G055710.1	Barley	nucleus	28.47	33.06
Zm00001d029940_P001	Maize	nucleus	28.11	32.78
GSMUA_Achr2P10490_001	Banana	nucleus	27.4	32.77
Bra032665.1-P	Field mustard	nucleus	18.51	32.7
Bra032512.1-P	Field mustard	nucleus	16.01	32.61
KRH33374	Soybean	nucleus	31.67	31.67
Bra028690.1-P	Field mustard	nucleus	20.28	31.32
TraesCS1B01G231500.1	Wheat	nucleus	28.11	30.86
OQU92128	Sorghum	nucleus	29.18	29.6
Bra021047.1-P	Field mustard	nucleus	18.86	29.28
Solyc05g052040.1.1	Tomato	nucleus	36.65	28.22
VIT_16s0013g00970.t01	Wine grape	nucleus	31.32	27.85
Os04t0547600-01	Rice	nucleus	32.38	27.74
Zm00001d002761_P001	Maize	nucleus	30.96	27.62
Bra035919.1-P	Field mustard	nucleus	19.93	27.59
Bra024954.1-P	Field mustard	nucleus	21.35	27.52
Bra022115.1-P	Field mustard	nucleus	22.42	27.51
Bra009250.1-P	Field mustard	nucleus	20.64	27.49
Bra012939.1-P	Field mustard	nucleus	19.22	27.27
Bra029319.1-P	Field mustard	nucleus	21.35	26.91
HORVU6Hr1G062430.1	Barley	nucleus	28.83	26.73
Bra017495.1-P	Field mustard	nucleus	23.13	26.53
Zm00001d017466_P001	Maize	nucleus	30.96	26.44
KXG31094	Sorghum	nucleus	31.32	25.73
EES11211	Sorghum	nucleus	29.54	25.7
EES11214	Sorghum	nucleus	25.98	25.61
TraesCS2B01G436100.1	Wheat	nucleus	30.96	25.51
TraesCS2A01G417100.1	Wheat	nucleus	31.32	25.51
Zm00001d051340_P001	Maize	nucleus	30.96	25.44
TraesCS2B01G436200.1	Wheat	nucleus	30.25	25.37
TraesCS2A01G417200.1	Wheat	nucleus	30.25	25.3
Zm00001d002760_P001	Maize	nucleus	32.03	25.28
TraesCS2D01G414300.1	Wheat	nucleus	30.61	25.07
TraesCS2D01G414500.1	Wheat	nucleus	29.89	25.0
KXG26836	Sorghum	nucleus	31.32	24.93
TraesCS6D01G225700.1	Wheat	nucleus	27.76	24.61
Bra040159.1-P	Field mustard	nucleus	21.0	24.58
TraesCS6B01G280800.1	Wheat	nucleus	27.76	24.53
Os02t0655200-02	Rice	nucleus	29.89	24.42
Bra021048.1-P	Field mustard	nucleus	22.06	24.41
TraesCS6A01G243500.1	Wheat	nucleus	27.76	24.38
KXG26835	Sorghum	nucleus	28.83	24.25
Bra012938.1-P	Field mustard	nucleus	21.0	22.87
Bra004873.1-P	Field mustard	nucleus	17.79	21.55
OQU76347	Sorghum	nucleus	22.06	20.95
Bra037630.1-P	Field mustard	nucleus	17.44	20.85
HORVU2Hr1G098140.2	Barley	mitochondrion, nucleus	23.13	18.16
Bra023749.1-P	Field mustard	nucleus	7.12	16.67

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra021049	EnsemblPlants:Bra021049.1
EnsemblPlants:Bra021049.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4DX03	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF43	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000254709A	SEG:seg

Description

AT4G17490 (E=6e-080) ATERF6, ERF-6-6 | ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6); DNA binding / transcription factor

Coordinates

chrA08:-:10226387..10227232

Molecular Weight (calculated)

31348.5 Da

IEP (calculated)

4.738

GRAVY (calculated)

-0.524

Length

281 amino acids

Sequence
(BLAST)

001: MATPSEASAL SFIKKHLLDE SSPLPKVTTT TNPWIASETS SDFSIFGSFD QTGFDFSEFE TKPEITDLVT PRFTDSFEFE PEANAEIQLA SSESFTFQSN
101: PRRKPPLKIE PPSRTEWIQF ATANPEPEQL PVHVAAEEKR HYSGARMRPF GKFAAEIRDP NRRGTRVWLG TFDTAIEAAR AYDQAAFRLR GSKAIVNFPL
201: EVGTWNPRAD VGQNKRKRDG EGEEVTVVAK ALKTEESHAV ETETSSLTAV DDWDLTELLS MPLLSPLSPH PPFGYPQLTV V

Best Arabidopsis Sequence Match ( AT4G17490.1 )
(BLAST)

001: MATPNEVSAL FLIKKYLLDE LSPLPTTATT NRWMNDFTSF DQTGFEFSEF ETKPEIIDLV TPKPEIFDFD VKSEIPSESN DSFTFQSNPP RVTVQSNRKP
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV

Arabidopsis Description

ERF6Ethylene-responsive transcription factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ91]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.