Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38399 | Canola | nucleus | 71.63 | 78.29 |
| CDY64966 | Canola | nucleus | 73.76 | 78.2 |
| Bra040158.1-P | Field mustard | nucleus | 73.76 | 78.2 |
| CDX76570 | Canola | nucleus | 74.82 | 75.36 |
| Bra021049.1-P | Field mustard | nucleus | 73.76 | 74.02 |
| CDY27922 | Canola | nucleus | 49.65 | 73.68 |
| AT5G47230.1 | Thale cress | nucleus | 62.06 | 58.33 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 36.17 | 44.54 |
| AT5G51190.1 | Thale cress | nucleus | 34.4 | 43.89 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 35.82 | 41.91 |
| AT3G23230.1 | Thale cress | nucleus | 20.57 | 41.73 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 34.4 | 40.08 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 15.6 | 39.64 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 37.23 | 39.18 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 37.94 | 38.63 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 37.94 | 38.63 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 37.23 | 38.18 |
| Solyc03g093550.1.1 | Tomato | nucleus | 32.62 | 38.17 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 37.59 | 38.13 |
| AT3G23220.1 | Thale cress | nucleus | 18.44 | 37.41 |
| AT5G43410.1 | Thale cress | nucleus | 17.38 | 37.4 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 25.89 | 37.24 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 36.52 | 37.18 |
| Solyc03g093560.1.1 | Tomato | nucleus | 31.91 | 36.89 |
| PGSC0003DMT400086995 | Potato | nucleus | 31.91 | 36.73 |
| Solyc03g093540.1.1 | Tomato | nucleus | 29.43 | 36.4 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 35.46 | 36.36 |
| PGSC0003DMT400090475 | Potato | nucleus | 31.21 | 35.92 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 33.33 | 35.61 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 29.79 | 35.59 |
| PGSC0003DMT400027937 | Potato | nucleus | 31.91 | 35.57 |
| KRG90129 | Soybean | nucleus | 33.33 | 35.34 |
| GSMUA_Achr11P... | Banana | nucleus | 23.4 | 34.74 |
| AT1G04370.1 | Thale cress | nucleus | 16.31 | 34.59 |
| Zm00001d029940_P001 | Maize | nucleus | 29.08 | 34.02 |
| PGSC0003DMT400041327 | Potato | nucleus | 35.46 | 33.78 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 28.01 | 33.47 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 28.72 | 33.47 |
| KRH33374 | Soybean | nucleus | 33.33 | 33.45 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 26.95 | 32.34 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 28.37 | 31.25 |
| OQU92128 | Sorghum | nucleus | 30.5 | 31.05 |
| AT5G61590.1 | Thale cress | nucleus | 20.57 | 28.86 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 32.27 | 28.8 |
| Solyc05g052040.1.1 | Tomato | nucleus | 36.52 | 28.22 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 20.57 | 28.02 |
| Zm00001d017466_P001 | Maize | nucleus | 32.27 | 27.66 |
| Zm00001d002761_P001 | Maize | nucleus | 30.85 | 27.62 |
| AT5G47220.1 | Thale cress | nucleus | 23.4 | 27.16 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 28.72 | 26.73 |
| KXG31094 | Sorghum | nucleus | 32.27 | 26.61 |
| Os04t0547600-01 | Rice | nucleus | 30.85 | 26.52 |
| Zm00001d051340_P001 | Maize | nucleus | 31.91 | 26.32 |
| EES11211 | Sorghum | nucleus | 30.14 | 26.32 |
| EES11214 | Sorghum | nucleus | 26.6 | 26.32 |
| Os02t0655200-02 | Rice | nucleus | 31.21 | 25.58 |
| Zm00001d002760_P001 | Maize | nucleus | 31.91 | 25.28 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 30.5 | 25.22 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 30.85 | 25.22 |
| KXG26835 | Sorghum | nucleus | 29.79 | 25.15 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 29.79 | 25.07 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 29.79 | 25.0 |
| KXG26836 | Sorghum | nucleus | 31.21 | 24.93 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 30.14 | 24.78 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 29.43 | 24.7 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 27.66 | 24.61 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 27.66 | 24.53 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 27.66 | 24.38 |
| AT4G17500.1 | Thale cress | nucleus | 23.05 | 24.25 |
| AT2G44840.1 | Thale cress | nucleus | 18.79 | 23.45 |
| AT5G61600.1 | Thale cress | nucleus | 19.86 | 23.24 |
| OQU76347 | Sorghum | nucleus | 24.11 | 22.97 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 21.28 | 16.76 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:827463 | EMBL:AB008316 | EMBL:AB013301 | ProteinID:AEE83902.1 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT4G17490 | EnsemblPlantsGene:AT4G17490 | RefSeq:AT4G17490 | TAIR:AT4G17490 |
| RefSeq:AT4G17490-TAIR-G | EnsemblPlants:AT4G17490.1 | TAIR:AT4G17490.1 | Symbol:ATERF6 | EMBL:AY065155 | EMBL:AY114588 |
| ProteinID:CAB10530.1 | ProteinID:CAB78752.1 | InterPro:DNA-bd_dom_sf | GO:GO:0000302 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009644 | GO:GO:0009719 | GO:GO:0009873 | GO:GO:0009987 | GO:GO:0010087 |
| GO:GO:0010200 | GO:GO:0051301 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_567529.1 | PFAM:PF00847 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | UniProt:Q8VZ91 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0000162A9F | SEG:seg | : | : | : | : |
Description
ERF6Ethylene-responsive transcription factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ91]
Coordinates
chr4:-:9752824..9754161
Molecular Weight (calculated)
32109.9 Da
IEP (calculated)
4.927
GRAVY (calculated)
-0.595
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPNEVSAL FLIKKYLLDE LSPLPTTATT NRWMNDFTSF DQTGFEFSEF ETKPEIIDLV TPKPEIFDFD VKSEIPSESN DSFTFQSNPP RVTVQSNRKP
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.