Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G111300.1 | |
| TraesCS7B01G009200.1 | |
| TraesCS7D01G106400.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | TraesCS7A01G111300.1 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | TraesCS7B01G009200.1 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | TraesCS7D01G106400.1 | AT2G43790.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G414500.1 | Wheat | nucleus | 94.33 | 94.05 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 86.87 | 85.34 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 70.15 | 65.64 |
| Os04t0547600-01 | Rice | nucleus | 59.1 | 60.37 |
| Zm00001d002761_P001 | Maize | nucleus | 55.52 | 59.05 |
| EES11211 | Sorghum | nucleus | 56.72 | 58.82 |
| KXG26835 | Sorghum | nucleus | 58.21 | 58.38 |
| EES11214 | Sorghum | nucleus | 47.16 | 55.44 |
| Zm00001d002760_P001 | Maize | nucleus | 58.51 | 55.06 |
| KXG26836 | Sorghum | nucleus | 57.91 | 54.96 |
| GSMUA_Achr11P... | Banana | nucleus | 27.16 | 47.89 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 42.69 | 44.97 |
| TraesCS1B01G158400.1 | Wheat | nucleus | 15.52 | 43.7 |
| TraesCS4B01G316800.1 | Wheat | nucleus | 15.52 | 42.62 |
| Bra035732.1-P | Field mustard | nucleus | 27.16 | 41.94 |
| CDX71695 | Canola | nucleus | 27.46 | 41.82 |
| CDY05842 | Canola | nucleus | 27.16 | 41.36 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 31.34 | 41.02 |
| TraesCS6B01G069200.1 | Wheat | nucleus | 15.22 | 40.16 |
| AT5G51190.1 | Thale cress | nucleus | 26.27 | 39.82 |
| TraesCS5B01G072200.1 | Wheat | nucleus | 14.03 | 38.84 |
| TraesCS4B01G001900.1 | Wheat | nucleus | 14.93 | 38.46 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 27.16 | 37.76 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 27.16 | 37.6 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 25.67 | 37.55 |
| KRH28164 | Soybean | nucleus | 30.45 | 36.96 |
| OQU76347 | Sorghum | nucleus | 32.24 | 36.49 |
| KRH77324 | Soybean | nucleus | 29.85 | 36.36 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 28.06 | 35.07 |
| Solyc03g093550.1.1 | Tomato | nucleus | 25.07 | 34.85 |
| PGSC0003DMT400027937 | Potato | nucleus | 26.27 | 34.78 |
| KRH04191 | Soybean | nucleus | 28.36 | 34.55 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 28.66 | 34.53 |
| Solyc03g093560.1.1 | Tomato | nucleus | 25.07 | 34.43 |
| PGSC0003DMT400086995 | Potato | nucleus | 25.07 | 34.29 |
| Solyc03g093540.1.1 | Tomato | nucleus | 23.28 | 34.21 |
| CDY38399 | Canola | nucleus | 26.27 | 34.11 |
| PGSC0003DMT400090475 | Potato | nucleus | 24.78 | 33.88 |
| KRH57483 | Soybean | nucleus | 28.06 | 33.81 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 11.04 | 33.33 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 27.46 | 33.21 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 27.16 | 33.09 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 27.16 | 32.85 |
| CDY40779 | Canola | nucleus | 17.61 | 32.42 |
| Bra028690.1-P | Field mustard | nucleus | 17.61 | 32.42 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 26.57 | 32.36 |
| CDY64966 | Canola | nucleus | 25.67 | 32.33 |
| Bra040158.1-P | Field mustard | nucleus | 25.67 | 32.33 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 26.57 | 32.13 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 25.07 | 31.82 |
| CDY27922 | Canola | nucleus | 17.91 | 31.58 |
| CDY64687 | Canola | nucleus | 26.87 | 31.36 |
| CDX76570 | Canola | nucleus | 25.97 | 31.07 |
| CDY14036 | Canola | nucleus | 17.31 | 30.69 |
| PGSC0003DMT400041328 | Potato | nucleus | 18.81 | 30.58 |
| Bra024953.1-P | Field mustard | nucleus | 26.87 | 30.51 |
| PGSC0003DMT400041327 | Potato | nucleus | 26.87 | 30.41 |
| Solyc05g052030.1.1 | Tomato | nucleus | 18.21 | 30.35 |
| Bra021049.1-P | Field mustard | nucleus | 25.37 | 30.25 |
| CDY60497 | Canola | nucleus | 18.51 | 30.1 |
| KRG90129 | Soybean | nucleus | 23.88 | 30.08 |
| PGSC0003DMT400067472 | Potato | nucleus | 24.78 | 29.86 |
| AT4G17490.1 | Thale cress | nucleus | 25.07 | 29.79 |
| CDY41042 | Canola | nucleus | 25.97 | 29.69 |
| Bra017493.1-P | Field mustard | nucleus | 25.97 | 29.59 |
| Solyc08g078190.1.1 | Tomato | nucleus | 28.36 | 29.5 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 18.21 | 29.47 |
| CDY25977 | Canola | nucleus | 25.97 | 29.39 |
| CDY64666 | Canola | nucleus | 18.51 | 29.38 |
| Bra009250.1-P | Field mustard | nucleus | 18.51 | 29.38 |
| CDY42869 | Canola | nucleus | 19.1 | 29.22 |
| AT5G47230.1 | Thale cress | nucleus | 25.97 | 29.0 |
| KRH33374 | Soybean | nucleus | 24.18 | 28.83 |
| Bra029319.1-P | Field mustard | nucleus | 19.1 | 28.7 |
| CDY67760 | Canola | nucleus | 19.1 | 28.44 |
| AT5G61590.1 | Thale cress | nucleus | 17.01 | 28.36 |
| KRH34607 | Soybean | nucleus | 17.01 | 28.36 |
| KRG92180 | Soybean | nucleus | 16.72 | 28.14 |
| CDY16811 | Canola | nucleus | 16.72 | 27.86 |
| KRG90130 | Soybean | nucleus | 17.31 | 27.75 |
| CDX77755 | Canola | nucleus | 25.67 | 27.74 |
| Bra035919.1-P | Field mustard | nucleus | 16.72 | 27.59 |
| CDY02130 | Canola | nucleus | 16.12 | 27.27 |
| Bra012939.1-P | Field mustard | nucleus | 16.12 | 27.27 |
| AT5G61600.1 | Thale cress | nucleus | 19.4 | 26.97 |
| CDY23053 | Canola | nucleus | 15.82 | 26.77 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 21.49 | 26.57 |
| CDX87222 | Canola | nucleus | 15.82 | 26.37 |
| KRH33376 | Soybean | nucleus | 17.31 | 26.36 |
| CDY23052 | Canola | nucleus | 20.0 | 26.17 |
| CDY02129 | Canola | nucleus | 19.4 | 25.9 |
| Bra012938.1-P | Field mustard | nucleus | 19.7 | 25.58 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 22.09 | 25.52 |
| Solyc05g052040.1.1 | Tomato | nucleus | 26.87 | 24.66 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 22.39 | 23.73 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF54 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2B01G436200 | EnsemblPlants:TraesCS2B01G436200.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:-:626883281..626884288
Molecular Weight (calculated)
35580.7 Da
IEP (calculated)
6.151
GRAVY (calculated)
-0.367
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFAGEVDDF ALDLIREHLL GGDGGVLPTA NDDQGPFGDD VTFPVLPPSA AEPEAYQQPM FFPQQGQRQV QTQGYMGLTH QYVNSYPAAA AVFRAPEPVM
101: IQFGGAPSPV RALSSTLTIS VPPQGTFGWA GTAAAAAPAP APVEDLRKYR GVRQRPWGKY AAEIRDPKRR GYREWLGTYD TSVEAARAYD RAAFRMRGAK
201: AILNFPNEVG TRGAQLWAPP PAGPASRAAG ATNKRKRSQD EDADVEVTGV VINKAVKAEA PSPSSARVSW DTPSSVSRGT ASSTVTSVAT TPEGGFPHTP
301: SSSGLEYWEA LMGGMPLLSP LSPHPALGFP QLSVS
101: IQFGGAPSPV RALSSTLTIS VPPQGTFGWA GTAAAAAPAP APVEDLRKYR GVRQRPWGKY AAEIRDPKRR GYREWLGTYD TSVEAARAYD RAAFRMRGAK
201: AILNFPNEVG TRGAQLWAPP PAGPASRAAG ATNKRKRSQD EDADVEVTGV VINKAVKAEA PSPSSARVSW DTPSSVSRGT ASSTVTSVAT TPEGGFPHTP
301: SSSGLEYWEA LMGGMPLLSP LSPHPALGFP QLSVS
001: MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG SSSSSFAPID FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
Arabidopsis Description
ERF5ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.