Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G141800.1 | Wheat | nucleus | 98.32 | 98.32 |
| TraesCS1D01G140900.1 | Wheat | nucleus | 95.8 | 95.8 |
| HORVU1Hr1G037530.1 | Barley | nucleus | 89.08 | 86.18 |
| TraesCS4B01G316800.1 | Wheat | nucleus | 72.27 | 70.49 |
| KXG38440 | Sorghum | nucleus | 81.51 | 70.29 |
| Zm00001d014113_P001 | Maize | nucleus | 78.15 | 67.88 |
| KRG95653 | Soybean | nucleus | 60.5 | 58.06 |
| GSMUA_Achr1P15350_001 | Banana | nucleus | 57.98 | 57.98 |
| KRH19547 | Soybean | nucleus | 58.82 | 50.72 |
| TraesCS5B01G072200.1 | Wheat | nucleus | 51.26 | 50.41 |
| CDX77538 | Canola | nucleus | 52.94 | 50.4 |
| KRH32175 | Soybean | nucleus | 57.98 | 50.37 |
| AT3G23220.1 | Thale cress | nucleus | 57.14 | 48.92 |
| TraesCS4B01G001900.1 | Wheat | nucleus | 52.1 | 47.69 |
| AT5G43410.1 | Thale cress | nucleus | 52.1 | 47.33 |
| CDX85070 | Canola | nucleus | 54.62 | 47.1 |
| Bra014924.1-P | Field mustard | nucleus | 53.78 | 46.38 |
| Bra027493.1-P | Field mustard | nucleus | 51.26 | 46.21 |
| CDY32941 | Canola | nucleus | 51.26 | 46.21 |
| CDY50478 | Canola | nucleus | 51.26 | 46.21 |
| TraesCS6B01G069200.1 | Wheat | nucleus | 48.74 | 45.67 |
| AT1G04370.1 | Thale cress | nucleus | 50.42 | 45.11 |
| CDY18225 | Canola | nucleus | 49.58 | 44.36 |
| Bra015310.1-P | Field mustard | nucleus | 49.58 | 44.03 |
| CDY60663 | Canola | nucleus | 49.58 | 44.03 |
| CDY53187 | Canola | nucleus | 49.58 | 43.7 |
| CDY10057 | Canola | nucleus | 49.58 | 43.7 |
| Bra032512.1-P | Field mustard | nucleus | 49.58 | 42.75 |
| CDY35515 | Canola | nucleus | 44.54 | 33.12 |
| Bra023749.1-P | Field mustard | nucleus | 29.41 | 29.17 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 42.86 | 19.92 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 42.02 | 17.24 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 45.38 | 16.98 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 38.66 | 16.97 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 43.7 | 15.52 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 43.7 | 15.25 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 |
| PANTHER:PTHR31190:SF42 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS1B01G158400 | EnsemblPlants:TraesCS1B01G158400.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:268899061..268899420
Molecular Weight (calculated)
12637.5 Da
IEP (calculated)
4.973
GRAVY (calculated)
-0.729
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDDKKTKYR GVRTRPWGKF AAEIRDPERG GARVWLGTFD TAEEAARAYD RAAFAQRGAT AVLNFPGEAG GAFGSSSSAP AGSGAGTGRG RGGTEKIELE
101: YLDDSLLDEL LDDSKYGGK
101: YLDDSLLDEL LDDSKYGGK
001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
Arabidopsis Description
ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.