Factsheet for Bra023749.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35515	Canola	nucleus	73.33	55.0
Bra014924.1-P	Field mustard	nucleus	43.33	37.68
AT3G23220.1	Thale cress	nucleus	40.0	34.53
Bra023748.1-P	Field mustard	nucleus	34.17	29.71
TraesCS1D01G140900.1	Wheat	nucleus	29.17	29.41
TraesCS1B01G158400.1	Wheat	nucleus	29.17	29.41
TraesCS1A01G141800.1	Wheat	nucleus	29.17	29.41
GSMUA_Achr1P15350_001	Banana	nucleus	29.17	29.41
Bra015310.1-P	Field mustard	nucleus	32.5	29.1
KRG95653	Soybean	nucleus	30.0	29.03
Bra027493.1-P	Field mustard	nucleus	31.67	28.79
Bra014925.1-P	Field mustard	nucleus	33.33	28.78
Bra032512.1-P	Field mustard	nucleus	32.5	28.26
HORVU1Hr1G037530.1	Barley	nucleus	28.33	27.64
HORVU4Hr1G080300.1	Barley	nucleus	28.33	27.64
TraesCS4B01G316800.1	Wheat	nucleus	27.5	27.05
TraesCS4D01G313400.1	Wheat	nucleus	27.5	27.05
Zm00001d014113_P001	Maize	nucleus	30.83	27.01
KRH32175	Soybean	nucleus	30.83	27.01
TraesCS4A01G416000.1	Wheat	nucleus	27.5	26.83
KRH19547	Soybean	nucleus	30.83	26.81
Os04t0257500-01	Rice	nucleus	28.33	26.56
Zm00001d027686_P001	Maize	nucleus	27.5	25.38
KXG40163	Sorghum	nucleus	26.67	24.06
KXG38440	Sorghum	nucleus	27.5	23.91
Zm00001d027687_P001	Maize	plastid	14.17	22.97
Os03t0150200-00	Rice	nucleus	25.0	21.28
Bra028690.1-P	Field mustard	nucleus	18.33	12.09
Bra029319.1-P	Field mustard	nucleus	21.67	11.66
Bra035919.1-P	Field mustard	nucleus	19.17	11.33
Bra032665.1-P	Field mustard	nucleus	15.0	11.32
Bra004873.1-P	Field mustard	nucleus	21.67	11.21
Bra012939.1-P	Field mustard	nucleus	18.33	11.11
Bra037630.1-P	Field mustard	nucleus	21.67	11.06
Bra035732.1-P	Field mustard	nucleus	20.0	11.06
Bra009250.1-P	Field mustard	nucleus	18.33	10.43
Bra012938.1-P	Field mustard	nucleus	21.67	10.08
Bra024954.1-P	Field mustard	nucleus	17.5	9.63
Bra021047.1-P	Field mustard	nucleus	14.17	9.39
Bra017495.1-P	Field mustard	nucleus	18.33	8.98
Bra022115.1-P	Field mustard	nucleus	16.67	8.73
Bra040158.1-P	Field mustard	nucleus	18.33	8.27
Bra024953.1-P	Field mustard	nucleus	19.17	7.8
Bra017493.1-P	Field mustard	nucleus	17.5	7.14
Bra021049.1-P	Field mustard	nucleus	16.67	7.12
Bra021048.1-P	Field mustard	nucleus	15.0	7.09
Bra040159.1-P	Field mustard	nucleus	14.17	7.08

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra023749
EnsemblPlants:Bra023749.1	EnsemblPlants:Bra023749.1-P	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4E4P5	PIRSF:PIRSF038123	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF68	UniParc:UPI0002543F62	SEG:seg	:	:	:

Description

AT3G23220 (E=1e-008) | DNA binding / transcription factor

Coordinates

chrA01:-:19594442..19594804

Molecular Weight (calculated)

13647.8 Da

IEP (calculated)

4.387

GRAVY (calculated)

-0.969

Length

120 amino acids

Sequence
(BLAST)

001: MEHKVSNTNE VKYRGVRKRP WGKYAAEIQD SPDMMRSGLE RLTLRKTRLG PHEYPMMTDD PSGASENVVA SSSSQFSGTD GGNMKEVIEF DYLDDSLLEE
101: LLECGENYNQ EDQNDTNHLL

Best Arabidopsis Sequence Match ( AT3G23220.1 )
(BLAST)

001: MERIESYNTN EMKYRGVRKR PWGKYAAEIR DSARHGARVW LGTFNTAEDA ARAYDRAAFG MRGQRAILNF PHEYQMMKDG PNGSHENAVA SSSSGYRGGG
101: GGDDGREVIE FEYLDDSLLE ELLDYGERSN QDNCNDANR

Arabidopsis Description

ERF095Ethylene-responsive transcription factor ERF095 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.