Factsheet for Bra004873.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74692	Canola	nucleus	99.57	99.57
CDY56473	Canola	nucleus	93.97	94.37
Bra037630.1-P	Field mustard	nucleus	84.48	83.4
AT2G44840.1	Thale cress	nucleus	76.72	78.76
Bra032665.1-P	Field mustard	nucleus	29.31	42.77
PGSC0003DMT400091474	Potato	nucleus	31.9	41.11
Solyc01g090310.2.1	Tomato	nucleus	31.47	40.56
Bra014925.1-P	Field mustard	nucleus	24.14	40.29
Bra023748.1-P	Field mustard	nucleus	23.71	39.86
Bra021047.1-P	Field mustard	nucleus	30.17	38.67
VIT_16s0013g00890.t01	Wine grape	nucleus	39.66	38.33
Bra027493.1-P	Field mustard	nucleus	21.12	37.12
Bra015310.1-P	Field mustard	nucleus	21.12	36.57
Bra032512.1-P	Field mustard	nucleus	21.55	36.23
PGSC0003DMT400067020	Potato	nucleus	31.03	35.64
Solyc01g090300.2.1	Tomato	nucleus	30.6	35.15
PGSC0003DMT400066853	Potato	nucleus	25.86	34.68
Bra040159.1-P	Field mustard	nucleus	35.78	34.58
Bra014924.1-P	Field mustard	nucleus	20.26	34.06
Bra024954.1-P	Field mustard	nucleus	31.9	33.95
Solyc01g090320.2.1	Tomato	nucleus	27.16	33.87
Bra021048.1-P	Field mustard	nucleus	37.07	33.86
PGSC0003DMT400091002	Potato	nucleus	31.47	33.49
Solyc01g090370.1.1	Tomato	nucleus	31.47	33.03
Bra022115.1-P	Field mustard	nucleus	32.33	32.75
PGSC0003DMT400018085	Potato	nucleus	26.29	32.28
Solyc05g050790.1.1	Tomato	nucleus	26.29	32.28
GSMUA_Achr11P...	Banana	nucleus	36.64	31.72
PGSC0003DMT400067013	Potato	nucleus	31.03	31.58
TraesCS2D01G414600.1	Wheat	nucleus	38.36	30.8
TraesCS2B01G436300.1	Wheat	nucleus	38.36	30.69
Bra017495.1-P	Field mustard	nucleus	32.33	30.61
PGSC0003DMT400097101	Potato	nucleus	28.88	30.59
GSMUA_Achr1P00490_001	Banana	nucleus	26.72	30.24
TraesCS2A01G417300.1	Wheat	nucleus	38.79	30.2
PGSC0003DMT400066846	Potato	nucleus	28.88	30.18
Zm00001d017462_P001	Maize	nucleus	36.64	30.14
Solyc01g090340.2.1	Tomato	nucleus	28.45	30.14
TraesCS6B01G281000.1	Wheat	nucleus	34.48	29.52
PGSC0003DMT400067018	Potato	nucleus	28.45	29.2
TraesCS6A01G243300.1	Wheat	nucleus	34.05	29.04
Zm00001d026191_P001	Maize	nucleus	33.62	28.89
TraesCS6D01G225500.1	Wheat	nucleus	33.62	28.57
Zm00001d002762_P001	Maize	nucleus	34.05	28.32
Bra028690.1-P	Field mustard	nucleus	21.98	28.02
Os02t0654700-01	Rice	nucleus	36.21	27.72
EES05793	Sorghum	nucleus	37.07	27.65
OQU82076	Sorghum	nucleus	34.48	27.3
HORVU6Hr1G062380.3	Barley	nucleus	35.34	27.15
Os04t0546800-01	Rice	nucleus	35.78	26.1
GSMUA_Achr5P21050_001	Banana	nucleus	35.78	25.08
Bra035919.1-P	Field mustard	nucleus	21.55	24.63
Bra012939.1-P	Field mustard	nucleus	20.69	24.24
Bra009250.1-P	Field mustard	nucleus	21.98	24.17
Bra035732.1-P	Field mustard	nucleus	22.41	23.96
Bra029319.1-P	Field mustard	nucleus	21.98	22.87
Bra023749.1-P	Field mustard	nucleus	11.21	21.67
Bra012938.1-P	Field mustard	nucleus	22.84	20.54
Bra040158.1-P	Field mustard	nucleus	21.55	18.8
Bra021049.1-P	Field mustard	nucleus	21.55	17.79
Bra017493.1-P	Field mustard	nucleus	21.98	17.35
Bra024953.1-P	Field mustard	nucleus	21.12	16.61

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra004873	EnsemblPlants:Bra004873.1
EnsemblPlants:Bra004873.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CKY7	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF75	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002547E36	SEG:seg

Description

AT2G44840 (E=3e-086) ATERF13, EREBP, ERF13 | ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13); DNA binding / transcription factor

Coordinates

chrA05:+:2234840..2235538

Molecular Weight (calculated)

25843.8 Da

IEP (calculated)

5.130

GRAVY (calculated)

-0.749

Length

232 amino acids

Sequence
(BLAST)

001: MSGFDYNDST NSADSVNNGV NPPVFYRNPS FSNVILNDNW SDLPLSVDDS QDMAIYNTLR DAVSSGWTPT VPPVSSPAEV TVREEKTETM VASEASGSNA
101: PPRQKGMQYR GVRRRPWGKF AAEIRDPKKN GARVWLGTYE TPEDAAVAYD RAAFQLKGSK AKLNFPHLIG TCKYEPVRIR PRRRSPEPSV SDYSSPEQKS
201: VGHVEDGESS LVVPNMDFTV DQSAYTYFDY QQ

Best Arabidopsis Sequence Match ( AT2G44840.1 )
(BLAST)

001: MSSSDSVNNG VNSRMYFRNP SFSNVILNDN WSDLPLSVDD SQDMAIYNTL RDAVSSGWTP SVPPVTSPAE ENKPPATKAS GSHAPRQKGM QYRGVRRRPW
101: GKFAAEIRDP KKNGARVWLG TYETPEDAAV AYDRAAFQLR GSKAKLNFPH LIGSCKYEPV RIRPRRRSPE PSVSDQLTSE QKRESHVDDG ESSLVVPELD
201: FTVDQFYFDG SLLMDQSECS YSDNRI

Arabidopsis Description

ERF13Ethylene-responsive transcription factor 13 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.