Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30489 | Canola | nucleus | 80.09 | 78.02 |
| Bra037630.1-P | Field mustard | nucleus | 80.53 | 77.45 |
| CDX74692 | Canola | nucleus | 79.2 | 77.16 |
| CDY56473 | Canola | nucleus | 78.76 | 77.06 |
| Bra004873.1-P | Field mustard | nucleus | 78.76 | 76.72 |
| CDY23459 | Canola | nucleus | 79.2 | 75.53 |
| PGSC0003DMT400091474 | Potato | nucleus | 33.19 | 41.67 |
| Solyc01g090310.2.1 | Tomato | nucleus | 32.3 | 40.56 |
| AT3G23230.1 | Thale cress | nucleus | 23.89 | 38.85 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 40.71 | 38.33 |
| AT1G04370.1 | Thale cress | nucleus | 22.12 | 37.59 |
| AT5G43410.1 | Thale cress | nucleus | 20.8 | 35.88 |
| PGSC0003DMT400067020 | Potato | nucleus | 31.86 | 35.64 |
| Solyc01g090300.2.1 | Tomato | nucleus | 31.42 | 35.15 |
| PGSC0003DMT400066853 | Potato | nucleus | 26.11 | 34.1 |
| PGSC0003DMT400091002 | Potato | nucleus | 32.74 | 33.95 |
| AT3G23220.1 | Thale cress | nucleus | 20.8 | 33.81 |
| PGSC0003DMT400018085 | Potato | nucleus | 27.88 | 33.33 |
| AT4G17500.1 | Thale cress | nucleus | 38.94 | 32.84 |
| Solyc01g090320.2.1 | Tomato | nucleus | 26.99 | 32.8 |
| Solyc05g050790.1.1 | Tomato | nucleus | 26.99 | 32.28 |
| AT5G47220.1 | Thale cress | nucleus | 34.51 | 32.1 |
| Solyc01g090370.1.1 | Tomato | nucleus | 30.97 | 31.67 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 28.32 | 31.22 |
| PGSC0003DMT400067013 | Potato | nucleus | 31.42 | 31.14 |
| GSMUA_Achr11P... | Banana | nucleus | 36.73 | 30.97 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 38.05 | 29.76 |
| PGSC0003DMT400097101 | Potato | nucleus | 28.76 | 29.68 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 38.05 | 29.66 |
| Zm00001d017462_P001 | Maize | nucleus | 36.73 | 29.43 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 38.5 | 29.19 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 34.96 | 29.15 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 34.96 | 29.04 |
| PGSC0003DMT400066846 | Potato | nucleus | 28.32 | 28.83 |
| Solyc01g090340.2.1 | Tomato | nucleus | 27.88 | 28.77 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 34.51 | 28.57 |
| Zm00001d026191_P001 | Maize | nucleus | 34.07 | 28.52 |
| PGSC0003DMT400067018 | Potato | nucleus | 28.32 | 28.32 |
| Zm00001d002762_P001 | Maize | nucleus | 34.51 | 27.96 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 35.84 | 26.82 |
| Os02t0654700-01 | Rice | nucleus | 35.84 | 26.73 |
| OQU82076 | Sorghum | nucleus | 34.51 | 26.62 |
| EES05793 | Sorghum | nucleus | 36.28 | 26.37 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 37.17 | 25.38 |
| Os04t0546800-01 | Rice | nucleus | 35.4 | 25.16 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 22.12 | 24.15 |
| AT5G51190.1 | Thale cress | nucleus | 22.57 | 23.08 |
| AT5G61590.1 | Thale cress | nucleus | 20.35 | 22.89 |
| AT5G61600.1 | Thale cress | nucleus | 22.12 | 20.75 |
| AT4G17490.1 | Thale cress | nucleus | 23.45 | 18.79 |
| AT5G47230.1 | Thale cress | nucleus | 24.34 | 18.33 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:819093 | ProteinID:AAC31840.1 | ProteinID:AEC10473.1 | EMBL:AF325089 |
| EMBL:AF370540 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT2G44840 | EnsemblPlantsGene:AT2G44840 | RefSeq:AT2G44840 |
| TAIR:AT2G44840 | RefSeq:AT2G44840-TAIR-G | EnsemblPlants:AT2G44840.1 | TAIR:AT2G44840.1 | Symbol:ATERF13 | EMBL:AY072471 |
| EMBL:AY088387 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009873 | GO:GO:0009987 |
| GO:GO:0010200 | GO:GO:0043565 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_182011.1 | PFAM:PF00847 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF75 | UniProt:Q8L9K1 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000009E6A2 |
| SEG:seg | : | : | : | : | : |
Description
ERF13Ethylene-responsive transcription factor 13 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9K1]
Coordinates
chr2:+:18495215..18496327
Molecular Weight (calculated)
25354.4 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.788
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSDSVNNG VNSRMYFRNP SFSNVILNDN WSDLPLSVDD SQDMAIYNTL RDAVSSGWTP SVPPVTSPAE ENKPPATKAS GSHAPRQKGM QYRGVRRRPW
101: GKFAAEIRDP KKNGARVWLG TYETPEDAAV AYDRAAFQLR GSKAKLNFPH LIGSCKYEPV RIRPRRRSPE PSVSDQLTSE QKRESHVDDG ESSLVVPELD
201: FTVDQFYFDG SLLMDQSECS YSDNRI
101: GKFAAEIRDP KKNGARVWLG TYETPEDAAV AYDRAAFQLR GSKAKLNFPH LIGSCKYEPV RIRPRRRSPE PSVSDQLTSE QKRESHVDDG ESSLVVPELD
201: FTVDQFYFDG SLLMDQSECS YSDNRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.