Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021048.1-P | Field mustard | nucleus | 79.48 | 83.86 |
| CDY38401 | Canola | nucleus | 70.9 | 83.7 |
| Bra021047.1-P | Field mustard | nucleus | 56.34 | 83.43 |
| CDY65883 | Canola | nucleus | 69.78 | 83.11 |
| CDY27923 | Canola | nucleus | 78.36 | 82.35 |
| Bra040159.1-P | Field mustard | nucleus | 73.13 | 81.67 |
| CDX76569 | Canola | nucleus | 54.48 | 81.11 |
| AT5G47220.1 | Thale cress | nucleus | 59.7 | 65.84 |
| KRH04192 | Soybean | nucleus | 51.49 | 54.98 |
| KRH57484 | Soybean | nucleus | 51.87 | 54.51 |
| KRH77323 | Soybean | nucleus | 52.24 | 51.09 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 53.73 | 51.06 |
| KRH28165 | Soybean | nucleus | 50.75 | 50.56 |
| GSMUA_Achr11P... | Banana | nucleus | 42.16 | 42.16 |
| AT1G04370.1 | Thale cress | nucleus | 20.15 | 40.6 |
| AT5G43410.1 | Thale cress | nucleus | 19.78 | 40.46 |
| AT3G23230.1 | Thale cress | nucleus | 20.52 | 39.57 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 42.16 | 39.1 |
| AT2G44840.1 | Thale cress | nucleus | 32.84 | 38.94 |
| Zm00001d002762_P001 | Maize | nucleus | 40.3 | 38.71 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 41.79 | 38.62 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 39.18 | 38.6 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 29.48 | 38.54 |
| Zm00001d026191_P001 | Maize | nucleus | 38.81 | 38.52 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 38.81 | 38.38 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 38.81 | 38.1 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 42.16 | 37.92 |
| AT3G23220.1 | Thale cress | nucleus | 19.4 | 37.41 |
| Zm00001d017462_P001 | Maize | nucleus | 38.81 | 36.88 |
| Os02t0654700-01 | Rice | nucleus | 41.42 | 36.63 |
| OQU82076 | Sorghum | nucleus | 39.55 | 36.18 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 39.18 | 34.77 |
| EES05793 | Sorghum | nucleus | 39.93 | 34.41 |
| Os04t0546800-01 | Rice | nucleus | 40.3 | 33.96 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 41.79 | 33.84 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 22.76 | 29.47 |
| AT5G51190.1 | Thale cress | nucleus | 22.76 | 27.6 |
| AT5G61590.1 | Thale cress | nucleus | 20.52 | 27.36 |
| AT5G47230.1 | Thale cress | nucleus | 27.61 | 24.67 |
| AT4G17490.1 | Thale cress | nucleus | 24.25 | 23.05 |
| AT5G61600.1 | Thale cress | nucleus | 19.4 | 21.58 |
Protein Annotations
| MapMan:15.5.7.1 | PDB:1GCC | PDB:2GCC | Gene3D:3.30.730.10 | PDB:3GCC | EntrezGene:827464 |
| EMBL:AB008103 | ProteinID:AEE83903.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT4G17500 | EnsemblPlantsGene:AT4G17500 |
| RefSeq:AT4G17500 | TAIR:AT4G17500 | RefSeq:AT4G17500-TAIR-G | EnsemblPlants:AT4G17500.1 | TAIR:AT4G17500.1 | Symbol:ATERF-1 |
| EMBL:AY058174 | EMBL:AY062533 | EMBL:BT002578 | ProteinID:CAB45963.1 | ProteinID:CAB78753.1 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009873 | GO:GO:0009987 | GO:GO:0010087 | GO:GO:0010200 |
| GO:GO:0051301 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_567530.4 | UniProt:O80337 | PFAM:PF00847 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 |
| PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000000BD88 | SEG:seg | : |
Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
Coordinates
chr4:+:9759203..9760391
Molecular Weight (calculated)
29191.3 Da
IEP (calculated)
8.783
GRAVY (calculated)
-0.491
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.