Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50478 | Canola | nucleus | 87.79 | 87.12 |
| CDY32941 | Canola | nucleus | 86.26 | 85.61 |
| Bra027493.1-P | Field mustard | nucleus | 86.26 | 85.61 |
| AT1G04370.1 | Thale cress | nucleus | 78.63 | 77.44 |
| GSMUA_Achr1P15350_001 | Banana | nucleus | 54.2 | 59.66 |
| AT3G23220.1 | Thale cress | nucleus | 59.54 | 56.12 |
| KRG95653 | Soybean | nucleus | 50.38 | 53.23 |
| TraesCS1D01G140900.1 | Wheat | nucleus | 47.33 | 52.1 |
| TraesCS1B01G158400.1 | Wheat | nucleus | 47.33 | 52.1 |
| TraesCS1A01G141800.1 | Wheat | nucleus | 46.56 | 51.26 |
| TraesCS4A01G416000.1 | Wheat | nucleus | 47.33 | 50.41 |
| KRH32175 | Soybean | nucleus | 52.67 | 50.37 |
| TraesCS4D01G313400.1 | Wheat | nucleus | 46.56 | 50.0 |
| TraesCS4B01G316800.1 | Wheat | nucleus | 46.56 | 50.0 |
| KRH19547 | Soybean | nucleus | 52.67 | 50.0 |
| AT3G23230.1 | Thale cress | nucleus | 52.67 | 49.64 |
| Zm00001d014113_P001 | Maize | nucleus | 51.91 | 49.63 |
| HORVU4Hr1G080300.1 | Barley | nucleus | 46.56 | 49.59 |
| HORVU1Hr1G037530.1 | Barley | nucleus | 45.8 | 48.78 |
| Zm00001d027686_P001 | Maize | nucleus | 48.09 | 48.46 |
| KXG38440 | Sorghum | nucleus | 49.62 | 47.1 |
| Os04t0257500-01 | Rice | nucleus | 45.04 | 46.09 |
| KXG40163 | Sorghum | nucleus | 43.51 | 42.86 |
| Os03t0150200-00 | Rice | nucleus | 45.8 | 42.55 |
| Zm00001d027687_P001 | Maize | plastid | 19.08 | 33.78 |
| AT5G51190.1 | Thale cress | nucleus | 41.98 | 24.89 |
| AT5G47220.1 | Thale cress | nucleus | 44.27 | 23.87 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 35.88 | 22.71 |
| AT5G61590.1 | Thale cress | nucleus | 34.35 | 22.39 |
| AT2G44840.1 | Thale cress | nucleus | 35.88 | 20.8 |
| AT5G61600.1 | Thale cress | nucleus | 38.17 | 20.75 |
| AT4G17500.1 | Thale cress | nucleus | 40.46 | 19.78 |
| AT4G17490.1 | Thale cress | nucleus | 37.4 | 17.38 |
| AT5G47230.1 | Thale cress | nucleus | 38.93 | 17.0 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | PDB:5WX9 | EntrezGene:834360 | UniProt:A0A178UK17 | ProteinID:AED94958.1 |
| InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT5G43410 | EnsemblPlantsGene:AT5G43410 | RefSeq:AT5G43410 |
| TAIR:AT5G43410 | RefSeq:AT5G43410-TAIR-G | EnsemblPlants:AT5G43410.1 | TAIR:AT5G43410.1 | EMBL:AY560864 | Unigene:At.50627 |
| ProteinID:BAA97420.1 | InterPro:DNA-bd_dom_sf | EMBL:DQ447034 | EMBL:DQ653344 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009789 |
| GO:GO:0009873 | GO:GO:0009987 | GO:GO:0010186 | GO:GO:0043565 | GO:GO:0045893 | GO:GO:0090332 |
| InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_199154.1 | ProteinID:OAO94168.1 | PFAM:PF00847 | PIRSF:PIRSF038123 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF68 | UniProt:Q9LSX0 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI00000A024F | SEG:seg | : | : | : |
Description
ERF096Ethylene-responsive transcription factor ERF096 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX0]
Coordinates
chr5:-:17435010..17435405
Molecular Weight (calculated)
14343.5 Da
IEP (calculated)
7.758
GRAVY (calculated)
-0.855
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQGGRGVGA EHGKYRGVRR RPWGKYAAEI RDSRKHGERV WLGTFDTAEE AARAYDQAAY SMRGQAAILN FPHEYNMGSG VSSSTAMAGS SSASASASSS
101: SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K
101: SRQVFEFEYL DDSVLEELLE EGEKPNKGKK K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.