Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G080300.1 | Barley | nucleus | 63.12 | 72.36 |
| TraesCS4B01G316800.1 | Wheat | nucleus | 62.41 | 72.13 |
| TraesCS4A01G416000.1 | Wheat | nucleus | 61.7 | 70.73 |
| TraesCS4D01G313400.1 | Wheat | nucleus | 60.99 | 70.49 |
| Zm00001d027686_P001 | Maize | nucleus | 64.54 | 70.0 |
| Os04t0257500-01 | Rice | nucleus | 63.12 | 69.53 |
| KXG40163 | Sorghum | nucleus | 60.28 | 63.91 |
| KRG95653 | Soybean | nucleus | 49.65 | 56.45 |
| GSMUA_Achr1P15350_001 | Banana | nucleus | 47.52 | 56.3 |
| Zm00001d027687_P001 | Maize | plastid | 26.95 | 51.35 |
| KRH19547 | Soybean | nucleus | 49.65 | 50.72 |
| KRH32175 | Soybean | nucleus | 48.94 | 50.37 |
| Os09t0571700-00 | Rice | nucleus | 46.1 | 49.62 |
| CDY32941 | Canola | nucleus | 45.39 | 48.48 |
| Bra027493.1-P | Field mustard | nucleus | 45.39 | 48.48 |
| CDY50478 | Canola | nucleus | 45.39 | 48.48 |
| CDX77538 | Canola | nucleus | 41.84 | 47.2 |
| CDY18225 | Canola | nucleus | 43.97 | 46.62 |
| CDY60663 | Canola | nucleus | 43.97 | 46.27 |
| Bra015310.1-P | Field mustard | nucleus | 43.97 | 46.27 |
| AT3G23220.1 | Thale cress | nucleus | 45.39 | 46.04 |
| AT1G04370.1 | Thale cress | nucleus | 43.26 | 45.86 |
| AT5G43410.1 | Thale cress | nucleus | 42.55 | 45.8 |
| CDY10057 | Canola | nucleus | 43.26 | 45.19 |
| Bra014924.1-P | Field mustard | nucleus | 43.97 | 44.93 |
| CDY53187 | Canola | nucleus | 42.55 | 44.44 |
| Bra032512.1-P | Field mustard | nucleus | 43.26 | 44.2 |
| CDX85070 | Canola | nucleus | 42.55 | 43.48 |
| CDY35515 | Canola | nucleus | 35.46 | 31.25 |
| Bra023749.1-P | Field mustard | nucleus | 21.28 | 25.0 |
| Os02t0654700-01 | Rice | nucleus | 38.3 | 17.82 |
| Os04t0547600-01 | Rice | nucleus | 40.43 | 17.38 |
| Os04t0546800-01 | Rice | nucleus | 37.59 | 16.67 |
| Os02t0655200-02 | Rice | nucleus | 39.72 | 16.28 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:4331633 | ProteinID:AAN87744.1 | ProteinID:ABF94003.1 | InterPro:AP2/ERF-transcript_factor |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EMBL:AY339376 | ProteinID:BAF10889.1 | ProteinID:BAS82314.1 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| EnsemblPlantsGene:Os03g0150200 | EnsemblPlants:Os03t0150200-00 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF42 | UniProt:Q8H075 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00000ADC24 |
| RefSeq:XP_015630244.1 | SEG:seg | : | : | : | : |
Description
ETHYLENE RESPONSE FACTOR 88Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5 homolog) (EREBP-4) (NtERF4). (Os03t0150200-00)
Coordinates
chr3:+:2800290..2800922
Molecular Weight (calculated)
15269.5 Da
IEP (calculated)
6.799
GRAVY (calculated)
-0.882
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDDKSKEGK SSSSYRGVRK RPWGKFAAEI RDPERGGARV WLGTFDTAEE AARAYDRAAF AMKGATAMLN FPGDHHHGAA SRMTSTGSSS SSFTTPPPAN
101: SSAAAGRGGS DRTTDKVELE CLDDKVLEDL LAETNYRDKN Y
101: SSAAAGRGGS DRTTDKVELE CLDDKVLEDL LAETNYRDKN Y
001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR
Arabidopsis Description
ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.