CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027686_P001	Maize	nucleus	82.71	84.62
TraesCS4D01G313400.1	Wheat	nucleus	73.68	80.33
TraesCS4B01G316800.1	Wheat	nucleus	72.93	79.51
TraesCS4A01G416000.1	Wheat	nucleus	72.93	78.86
HORVU4Hr1G080300.1	Barley	nucleus	72.93	78.86
Zm00001d027687_P001	Maize	plastid	40.6	72.97
Os04t0257500-01	Rice	nucleus	66.17	68.75
Os03t0150200-00	Rice	nucleus	63.91	60.28
KXG38440	Sorghum	nucleus	61.65	59.42
GSMUA_Achr1P15350_001	Banana	nucleus	51.88	57.98
KRG95653	Soybean	nucleus	48.87	52.42
KXG25362	Sorghum	nucleus	51.13	51.91
KXG35151	Sorghum	nucleus	49.62	51.16
CDX77538	Canola	nucleus	44.36	47.2
KRH19547	Soybean	nucleus	48.87	47.1
KRH32175	Soybean	nucleus	48.12	46.72
AT3G23220.1	Thale cress	nucleus	47.37	45.32
Bra027493.1-P	Field mustard	nucleus	44.36	44.7
CDY32941	Canola	nucleus	44.36	44.7
Bra014924.1-P	Field mustard	nucleus	45.86	44.2
CDY50478	Canola	nucleus	43.61	43.94
AT1G04370.1	Thale cress	nucleus	43.61	43.61
CDY18225	Canola	nucleus	43.61	43.61
AT5G43410.1	Thale cress	nucleus	42.86	43.51
CDX85070	Canola	nucleus	45.11	43.48
CDY60663	Canola	nucleus	43.61	43.28
Bra015310.1-P	Field mustard	nucleus	43.61	43.28
CDY10057	Canola	nucleus	42.11	41.48
CDY53187	Canola	nucleus	42.11	41.48
Bra032512.1-P	Field mustard	nucleus	42.11	40.58
CDY35515	Canola	nucleus	37.59	31.25
Bra023749.1-P	Field mustard	nucleus	24.06	26.67
OQU92128	Sorghum	nucleus	39.85	19.13
EES11214	Sorghum	nucleus	38.35	17.89
OQU76347	Sorghum	nucleus	37.59	16.89
OQU82076	Sorghum	nucleus	36.09	16.38
KXG31094	Sorghum	nucleus	41.35	16.08
KXG26835	Sorghum	nucleus	39.85	15.87
EES11211	Sorghum	nucleus	38.35	15.79
KXG26836	Sorghum	nucleus	39.85	15.01
EES05793	Sorghum	nucleus	34.59	14.79

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A1B6QQI7	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	EnsemblPlants:KXG40163	ProteinID:KXG40163	ProteinID:KXG40163.1	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF42	SMART:SM00380	EnsemblPlantsGene:SORBI_3001G502300
SUPFAM:SSF54171	UniParc:UPI0003C6DCF8	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:77097375..77097776

Molecular Weight (calculated)

14202.5 Da

IEP (calculated)

6.799

GRAVY (calculated)

-0.802

Length

133 amino acids

Sequence
(BLAST)

001: MEDDKKEGKY RGVRKRPWGK FAAEIRDPER GGSRVWLGTF DTAEEAARAY DRAAFAMKGA TAVLNFPAGA AGGRETGGGG GSSSTSAPAA MGGGASRGRA
101: PRPVPDSEKL ELECLDDRVL EEMLAEDKYN KNY

Best Arabidopsis Sequence Match ( AT3G23230.1 )
(BLAST)

001: MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS
101: SSGSTSTNVS RQNQREVFEF EYLDDKVLEE LLDSEERKR

Arabidopsis Description

ERF098Ethylene-responsive transcription factor ERF098 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.