Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 5
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017462_P001 | Maize | nucleus | 80.39 | 88.65 |
| Os02t0654700-01 | Rice | nucleus | 73.31 | 75.25 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 72.35 | 74.5 |
| OQU82076 | Sorghum | nucleus | 67.2 | 71.33 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 65.59 | 70.59 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 65.27 | 70.0 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 66.24 | 69.13 |
| Os04t0546800-01 | Rice | nucleus | 63.99 | 62.58 |
| KRG92185 | Soybean | nucleus | 17.68 | 60.44 |
| GSMUA_Achr11P... | Banana | nucleus | 46.62 | 54.1 |
| Bra021047.1-P | Field mustard | nucleus | 27.65 | 47.51 |
| CDX76569 | Canola | nucleus | 27.33 | 47.22 |
| KRH57484 | Soybean | nucleus | 38.26 | 46.67 |
| KRH04192 | Soybean | nucleus | 37.3 | 46.22 |
| Solyc03g093610.1.1 | Tomato | nucleus | 35.69 | 45.87 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 35.37 | 45.83 |
| PGSC0003DMT400027932 | Potato | nucleus | 36.33 | 45.75 |
| PGSC0003DMT400041331 | Potato | nucleus | 33.76 | 45.65 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 41.16 | 45.39 |
| CDY38401 | Canola | nucleus | 33.12 | 45.37 |
| CDY43434 | Canola | nucleus | 32.8 | 44.74 |
| KRH28165 | Soybean | nucleus | 38.59 | 44.61 |
| KRH77323 | Soybean | nucleus | 39.23 | 44.53 |
| CDY33523 | Canola | nucleus | 30.87 | 44.44 |
| Solyc05g052050.1.1 | Tomato | nucleus | 33.44 | 44.44 |
| PGSC0003DMT400005836 | Potato | nucleus | 28.3 | 44.22 |
| Solyc08g007230.1.1 | Tomato | nucleus | 27.97 | 43.72 |
| CDX77750 | Canola | nucleus | 31.19 | 43.69 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 46.3 | 43.5 |
| Bra024954.1-P | Field mustard | nucleus | 30.23 | 43.12 |
| CDY68787 | Canola | nucleus | 31.19 | 43.11 |
| KRH66522 | Soybean | nucleus | 27.01 | 43.08 |
| CDY25978 | Canola | nucleus | 33.12 | 42.92 |
| CDY65883 | Canola | nucleus | 30.87 | 42.67 |
| Bra022115.1-P | Field mustard | nucleus | 31.19 | 42.36 |
| CDY28965 | Canola | nucleus | 31.19 | 42.17 |
| Bra021048.1-P | Field mustard | nucleus | 34.08 | 41.73 |
| Bra040159.1-P | Field mustard | nucleus | 32.15 | 41.67 |
| Bra017495.1-P | Field mustard | nucleus | 32.8 | 41.63 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 28.62 | 41.59 |
| CDY27923 | Canola | nucleus | 34.08 | 41.57 |
| PGSC0003DMT400067535 | Potato | nucleus | 31.19 | 41.45 |
| PGSC0003DMT400067534 | Potato | nucleus | 30.87 | 41.2 |
| Solyc08g078180.1.1 | Tomato | nucleus | 30.55 | 40.6 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 27.01 | 40.58 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 26.69 | 40.49 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 26.69 | 40.49 |
| Solyc08g078170.1.1 | Tomato | nucleus | 30.55 | 40.08 |
| KRH48809 | Soybean | nucleus | 19.94 | 40.0 |
| AT4G17500.1 | Thale cress | nucleus | 34.41 | 39.93 |
| AT5G47220.1 | Thale cress | nucleus | 31.19 | 39.92 |
| KRH66533 | Soybean | nucleus | 18.65 | 38.41 |
| Bra032665.1-P | Field mustard | nucleus | 19.61 | 38.36 |
| KXG25362 | Sorghum | nucleus | 16.08 | 38.17 |
| KXG35151 | Sorghum | nucleus | 15.76 | 37.98 |
| CDY38052 | Canola | nucleus | 20.26 | 37.95 |
| KXG38440 | Sorghum | nucleus | 16.72 | 37.68 |
| CDY30489 | Canola | nucleus | 27.97 | 37.5 |
| PGSC0003DMT400091474 | Potato | nucleus | 21.54 | 37.22 |
| Solyc01g090310.2.1 | Tomato | nucleus | 21.54 | 37.22 |
| Bra004873.1-P | Field mustard | nucleus | 27.65 | 37.07 |
| CDX74692 | Canola | nucleus | 27.65 | 37.07 |
| CDY56473 | Canola | nucleus | 27.33 | 36.8 |
| KRH01076 | Soybean | nucleus | 23.79 | 36.63 |
| Bra037630.1-P | Field mustard | nucleus | 27.65 | 36.6 |
| AT2G44840.1 | Thale cress | nucleus | 26.37 | 36.28 |
| KRH48815 | Soybean | nucleus | 27.97 | 36.25 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 23.79 | 36.1 |
| KRH01075 | Soybean | nucleus | 18.97 | 35.98 |
| KRH40171 | Soybean | nucleus | 23.47 | 35.96 |
| KRH01077 | Soybean | nucleus | 24.12 | 35.55 |
| CDY23459 | Canola | nucleus | 27.01 | 35.44 |
| KRH48811 | Soybean | nucleus | 22.83 | 34.63 |
| KXG40163 | Sorghum | nucleus | 14.79 | 34.59 |
| KRH66529 | Soybean | nucleus | 20.58 | 33.86 |
| KRH66532 | Soybean | nucleus | 23.79 | 33.18 |
| PGSC0003DMT400066846 | Potato | nucleus | 23.47 | 32.88 |
| PGSC0003DMT400018085 | Potato | nucleus | 19.94 | 32.8 |
| PGSC0003DMT400067020 | Potato | nucleus | 21.22 | 32.67 |
| Solyc05g050790.1.1 | Tomato | nucleus | 19.61 | 32.28 |
| Solyc01g090320.2.1 | Tomato | nucleus | 19.29 | 32.26 |
| Solyc01g090300.2.1 | Tomato | nucleus | 20.9 | 32.18 |
| PGSC0003DMT400091002 | Potato | nucleus | 22.51 | 32.11 |
| KRH66525 | Soybean | nucleus | 20.26 | 31.98 |
| Solyc01g090340.2.1 | Tomato | nucleus | 22.51 | 31.96 |
| Solyc01g090370.1.1 | Tomato | nucleus | 22.19 | 31.22 |
| PGSC0003DMT400066853 | Potato | nucleus | 17.36 | 31.21 |
| PGSC0003DMT400067013 | Potato | nucleus | 22.83 | 31.14 |
| PGSC0003DMT400067018 | Potato | nucleus | 20.9 | 28.76 |
| KRH66526 | Soybean | nucleus | 17.68 | 27.92 |
| PGSC0003DMT400097101 | Potato | nucleus | 19.61 | 27.85 |
| OQU92128 | Sorghum | nucleus | 23.15 | 25.99 |
| KXG31094 | Sorghum | nucleus | 26.37 | 23.98 |
| KRH66523 | Soybean | nucleus | 12.86 | 23.81 |
| EES11211 | Sorghum | nucleus | 23.15 | 22.29 |
| KXG26835 | Sorghum | nucleus | 23.79 | 22.16 |
| KXG26836 | Sorghum | nucleus | 24.44 | 21.53 |
| EES11214 | Sorghum | nucleus | 19.29 | 21.05 |
| OQU76347 | Sorghum | nucleus | 16.08 | 16.89 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:8073968 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | UniProt:C5XS01 |
| InterPro:DNA-bd_dom_sf | EnsemblPlants:EES05793 | ProteinID:EES05793 | ProteinID:EES05793.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF74 | SMART:SM00380 | EnsemblPlantsGene:SORBI_3004G297100 | SUPFAM:SSF54171 |
| unigene:Sbi.16868 | UniParc:UPI0001A85FD0 | RefSeq:XP_002452817.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:63669372..63670307
Molecular Weight (calculated)
32427.8 Da
IEP (calculated)
5.398
GRAVY (calculated)
-0.273
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLNPACEA AALDTIRHHL LDEPAASSVS MSAAPPRPVY CRSTSFGSLV ADQWSESLPF RPDDADDMVV FGALRDAFSR GWLPDGSFAA VKPEPLASSP
101: DDDSSPYDHG SYSYLGGGAV GGLLRAAEEP ETPTEAAAMT PGTASEEEAA VAVAGRGKHY RGVRQRPWGK FAAEIRDPAK NGARVWLGTY DSAEDAAVAY
201: DRAAYRMRGS RALLNFPLRI SSEIAAAITA AAPAPAVGDK RASPEPTASS DSSSPSSSSS SGTPKRRKRG EAAAATMAMA LVPPPPAQAP VQLTLPAHPW
301: FAAGPVQQLV S
101: DDDSSPYDHG SYSYLGGGAV GGLLRAAEEP ETPTEAAAMT PGTASEEEAA VAVAGRGKHY RGVRQRPWGK FAAEIRDPAK NGARVWLGTY DSAEDAAVAY
201: DRAAYRMRGS RALLNFPLRI SSEIAAAITA AAPAPAVGDK RASPEPTASS DSSSPSSSSS SGTPKRRKRG EAAAATMAMA LVPPPPAQAP VQLTLPAHPW
301: FAAGPVQQLV S
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.