Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43434 | Canola | nucleus | 90.83 | 95.61 |
| Bra017495.1-P | Field mustard | nucleus | 97.08 | 95.1 |
| CDY33523 | Canola | nucleus | 75.83 | 84.26 |
| CDX77750 | Canola | nucleus | 77.92 | 84.23 |
| CDY68787 | Canola | nucleus | 74.58 | 79.56 |
| CDY28965 | Canola | nucleus | 75.83 | 79.13 |
| AT5G47220.1 | Thale cress | nucleus | 69.58 | 68.72 |
| CDX76569 | Canola | nucleus | 47.92 | 63.89 |
| CDY38401 | Canola | nucleus | 59.58 | 63.0 |
| CDY65883 | Canola | nucleus | 57.5 | 61.33 |
| CDY27923 | Canola | nucleus | 63.75 | 60.0 |
| KRH57484 | Soybean | nucleus | 51.25 | 48.24 |
| KRH04192 | Soybean | nucleus | 50.42 | 48.21 |
| KRH77323 | Soybean | nucleus | 53.75 | 47.08 |
| KRH28165 | Soybean | nucleus | 50.42 | 44.98 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 52.08 | 44.33 |
| CDY50478 | Canola | nucleus | 23.33 | 42.42 |
| CDY32941 | Canola | nucleus | 22.92 | 41.67 |
| CDY18225 | Canola | nucleus | 22.92 | 41.35 |
| CDY60663 | Canola | nucleus | 22.92 | 41.04 |
| CDX77537 | Canola | nucleus | 23.75 | 41.01 |
| CDY10057 | Canola | nucleus | 22.92 | 40.74 |
| CDY53187 | Canola | nucleus | 22.92 | 40.74 |
| CDX85071 | Canola | nucleus | 23.33 | 40.58 |
| CDX77538 | Canola | nucleus | 20.83 | 40.0 |
| CDY38052 | Canola | nucleus | 27.5 | 39.76 |
| CDY35516 | Canola | nucleus | 22.5 | 39.13 |
| GSMUA_Achr11P... | Banana | nucleus | 42.5 | 38.06 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 31.67 | 37.07 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 41.67 | 36.76 |
| Zm00001d026191_P001 | Maize | nucleus | 41.25 | 36.67 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 41.25 | 36.53 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 41.25 | 36.26 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 43.33 | 35.99 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 43.33 | 35.86 |
| Zm00001d002762_P001 | Maize | nucleus | 41.67 | 35.84 |
| CDX85070 | Canola | nucleus | 20.42 | 35.51 |
| Zm00001d017462_P001 | Maize | nucleus | 41.25 | 35.11 |
| Os02t0654700-01 | Rice | nucleus | 43.75 | 34.65 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 42.92 | 34.56 |
| OQU82076 | Sorghum | nucleus | 42.08 | 34.47 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 42.5 | 33.77 |
| CDY30489 | Canola | nucleus | 32.08 | 33.19 |
| EES05793 | Sorghum | nucleus | 42.92 | 33.12 |
| CDX74692 | Canola | nucleus | 31.67 | 32.76 |
| CDY56473 | Canola | nucleus | 31.25 | 32.47 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 44.17 | 32.02 |
| CDY23459 | Canola | nucleus | 31.25 | 31.65 |
| Os04t0546800-01 | Rice | nucleus | 41.67 | 31.45 |
| CDY40779 | Canola | nucleus | 23.33 | 30.77 |
| CDY60497 | Canola | nucleus | 25.0 | 29.13 |
| CDY14036 | Canola | nucleus | 22.92 | 29.1 |
| CDY23053 | Canola | nucleus | 23.75 | 28.79 |
| CDY64666 | Canola | nucleus | 25.0 | 28.44 |
| CDY02130 | Canola | nucleus | 23.33 | 28.28 |
| CDY16811 | Canola | nucleus | 23.33 | 27.86 |
| CDX71695 | Canola | nucleus | 24.17 | 26.36 |
| CDY05842 | Canola | nucleus | 24.17 | 26.36 |
| CDX87222 | Canola | nucleus | 21.67 | 25.87 |
| CDY38399 | Canola | nucleus | 27.5 | 25.58 |
| CDY08986 | Canola | nucleus | 22.5 | 25.47 |
| CDY64966 | Canola | nucleus | 27.08 | 24.44 |
| CDY35515 | Canola | nucleus | 16.25 | 24.38 |
| CDY42869 | Canola | nucleus | 22.08 | 24.2 |
| CDY64687 | Canola | nucleus | 28.33 | 23.69 |
| CDY25977 | Canola | nucleus | 29.17 | 23.65 |
| CDX76570 | Canola | nucleus | 27.5 | 23.57 |
| CDY67760 | Canola | nucleus | 22.08 | 23.56 |
| CDY41042 | Canola | nucleus | 28.33 | 23.21 |
| CDX77755 | Canola | nucleus | 28.75 | 22.26 |
| CDY27922 | Canola | nucleus | 16.67 | 21.05 |
| CDY02129 | Canola | nucleus | 21.67 | 20.72 |
| CDY23052 | Canola | nucleus | 21.67 | 20.31 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078GMX5 | UniProt:A0A078GMX5 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY25978 | ProteinID:CDY25978 | ProteinID:CDY25978.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00033505001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EB6B4D | SEG:seg | : | : | : | : |
Description
BnaC09g20090DBnaC09g20090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMX5]
Coordinates
chrLK032183:+:493895..494763
Molecular Weight (calculated)
26531.9 Da
IEP (calculated)
5.237
GRAVY (calculated)
-0.649
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGQGEIMAA TETEYAVLES IRRHLLGGET ELQFSESIPS SCFTESWGDL PLKENDSEDM LVYGVLNDAF NRAACETSSP SSDLSCLSDF LDKPPANPSH
101: NDFPAVKTEP AENLAAVAEK PKEVAPPAKG KHYRGVRQRP WGKFAAEIRD PAKFGARVWL GTFEKAEDAA LAYDRAAFRM RGSRALLNFP WRVNSGEPDP
201: VRIPSKRSYT SSSSSDNGTP KRRRNTEEVP SELQVKCEVA
101: NDFPAVKTEP AENLAAVAEK PKEVAPPAKG KHYRGVRQRP WGKFAAEIRD PAKFGARVWL GTFEKAEDAA LAYDRAAFRM RGSRALLNFP WRVNSGEPDP
201: VRIPSKRSYT SSSSSDNGTP KRRRNTEEVP SELQVKCEVA
001: MYGQCNIESD YALLESITRH LLGGGGENEL RLNESTPSSC FTESWGGLPL KENDSEDMLV YGLLKDAFHF DTSSSDLSCL FDFPAVKVEP TENFTAMEEK
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
Arabidopsis Description
ERF2ERF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UCP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.