Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040158.1-P | Field mustard | nucleus | 96.12 | 93.23 |
| CDY64966 | Canola | nucleus | 96.12 | 93.23 |
| CDY27922 | Canola | nucleus | 58.14 | 78.95 |
| CDX76570 | Canola | nucleus | 83.33 | 76.79 |
| AT4G17490.1 | Thale cress | nucleus | 78.29 | 71.63 |
| CDY25977 | Canola | nucleus | 60.47 | 52.7 |
| CDY41042 | Canola | nucleus | 59.3 | 52.22 |
| CDY64687 | Canola | nucleus | 57.75 | 51.92 |
| CDX77755 | Canola | nucleus | 60.08 | 50.0 |
| CDX71695 | Canola | nucleus | 37.6 | 44.09 |
| CDY05842 | Canola | nucleus | 36.82 | 43.18 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 36.05 | 40.61 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 37.98 | 40.5 |
| CDX85071 | Canola | nucleus | 21.32 | 39.86 |
| CDY35516 | Canola | nucleus | 21.32 | 39.86 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 37.21 | 39.83 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 30.23 | 39.8 |
| CDX77537 | Canola | nucleus | 21.32 | 39.57 |
| CDY32941 | Canola | nucleus | 19.77 | 38.64 |
| CDY50478 | Canola | nucleus | 19.77 | 38.64 |
| Solyc03g093550.1.1 | Tomato | nucleus | 36.05 | 38.59 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 39.92 | 38.43 |
| CDX77538 | Canola | nucleus | 18.22 | 37.6 |
| Solyc03g093560.1.1 | Tomato | nucleus | 35.27 | 37.3 |
| Solyc03g093540.1.1 | Tomato | nucleus | 32.95 | 37.28 |
| PGSC0003DMT400086995 | Potato | nucleus | 35.27 | 37.14 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 33.72 | 36.86 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 39.15 | 36.46 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 39.15 | 36.46 |
| PGSC0003DMT400027937 | Potato | nucleus | 35.66 | 36.36 |
| PGSC0003DMT400090475 | Potato | nucleus | 34.5 | 36.33 |
| CDY18225 | Canola | nucleus | 18.6 | 36.09 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 38.37 | 36.0 |
| CDY60663 | Canola | nucleus | 18.6 | 35.82 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 38.37 | 35.74 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 38.37 | 35.61 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 37.21 | 34.91 |
| CDY10057 | Canola | nucleus | 18.22 | 34.81 |
| CDY53187 | Canola | nucleus | 18.22 | 34.81 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 35.27 | 34.47 |
| PGSC0003DMT400041327 | Potato | nucleus | 39.53 | 34.46 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 31.4 | 34.32 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 32.17 | 34.3 |
| GSMUA_Achr11P... | Banana | nucleus | 25.19 | 34.21 |
| KRG90129 | Soybean | nucleus | 35.27 | 34.21 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 31.01 | 34.04 |
| Zm00001d029940_P001 | Maize | nucleus | 31.78 | 34.02 |
| CDY40779 | Canola | nucleus | 23.64 | 33.52 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 14.34 | 33.33 |
| CDY14036 | Canola | nucleus | 24.03 | 32.8 |
| CDX85070 | Canola | nucleus | 17.44 | 32.61 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 32.17 | 32.42 |
| KRH33374 | Soybean | nucleus | 35.27 | 32.38 |
| CDY38052 | Canola | nucleus | 20.16 | 31.33 |
| CDX76569 | Canola | nucleus | 21.71 | 31.11 |
| OQU92128 | Sorghum | nucleus | 33.33 | 31.05 |
| CDY60497 | Canola | nucleus | 24.03 | 30.1 |
| CDY16811 | Canola | nucleus | 23.26 | 29.85 |
| CDY33523 | Canola | nucleus | 24.81 | 29.63 |
| CDY64666 | Canola | nucleus | 24.03 | 29.38 |
| CDY43434 | Canola | nucleus | 25.58 | 28.95 |
| CDX87222 | Canola | nucleus | 22.48 | 28.86 |
| CDX77750 | Canola | nucleus | 24.81 | 28.83 |
| Zm00001d002761_P001 | Maize | nucleus | 34.88 | 28.57 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 34.88 | 28.48 |
| Os04t0547600-01 | Rice | nucleus | 36.05 | 28.35 |
| CDY02130 | Canola | nucleus | 21.71 | 28.28 |
| CDY23053 | Canola | nucleus | 21.71 | 28.28 |
| Solyc05g052040.1.1 | Tomato | nucleus | 39.92 | 28.22 |
| CDY67760 | Canola | nucleus | 24.42 | 28.0 |
| CDY42869 | Canola | nucleus | 23.64 | 27.85 |
| CDY25978 | Canola | nucleus | 25.58 | 27.5 |
| CDY38401 | Canola | nucleus | 24.03 | 27.31 |
| EES11211 | Sorghum | nucleus | 34.11 | 27.24 |
| Zm00001d017466_P001 | Maize | nucleus | 34.5 | 27.05 |
| Zm00001d051340_P001 | Maize | nucleus | 35.66 | 26.9 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 31.4 | 26.73 |
| CDY68787 | Canola | nucleus | 23.26 | 26.67 |
| KXG26835 | Sorghum | nucleus | 34.5 | 26.65 |
| KXG31094 | Sorghum | nucleus | 35.27 | 26.61 |
| CDY28965 | Canola | nucleus | 23.64 | 26.52 |
| CDY08986 | Canola | nucleus | 21.71 | 26.42 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 34.11 | 26.27 |
| CDY65883 | Canola | nucleus | 22.87 | 26.22 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 34.11 | 26.19 |
| Zm00001d002760_P001 | Maize | nucleus | 36.05 | 26.12 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 34.5 | 26.1 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 34.88 | 26.09 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 33.72 | 25.89 |
| CDY27923 | Canola | nucleus | 25.58 | 25.88 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 34.11 | 25.66 |
| EES11214 | Sorghum | nucleus | 28.29 | 25.61 |
| Os02t0655200-02 | Rice | nucleus | 33.72 | 25.29 |
| CDY35515 | Canola | nucleus | 15.5 | 25.0 |
| KXG26836 | Sorghum | nucleus | 34.11 | 24.93 |
| CDY23052 | Canola | nucleus | 24.42 | 24.61 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 30.23 | 24.61 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 30.23 | 24.53 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 30.23 | 24.38 |
| CDY02129 | Canola | nucleus | 23.64 | 24.3 |
| OQU76347 | Sorghum | nucleus | 27.52 | 23.99 |
| CDY56473 | Canola | nucleus | 19.38 | 21.64 |
| CDX74692 | Canola | nucleus | 19.38 | 21.55 |
| CDY30489 | Canola | nucleus | 18.99 | 21.12 |
| CDY23459 | Canola | nucleus | 18.99 | 20.68 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 25.19 | 18.16 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078HM07 | UniProt:A0A078HM07 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY38399 | ProteinID:CDY38399 | ProteinID:CDY38399.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00065826001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EF2A7A | SEG:seg | : | : | : | : |
Description
BnaC01g10080DBnaC01g10080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HM07]
Coordinates
chrLK032423:-:172775..173816
Molecular Weight (calculated)
29146.2 Da
IEP (calculated)
5.774
GRAVY (calculated)
-0.607
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPSETSAL FFIKKHLLDE FSPLPNATTT NPWETSSDFS FFGSFDQTGF DFPEFETKPE ITDTPLAPND SFTFQSNRKP PLKIAPPNRT EWIQFAAGNP
101: QREQIPLPQV AAEEKRHYRG VRMRPWGKFA AEIRDPTRRG TRVWLGTFDT AVEAARAYDQ AAFRLRGAKA IVNFPLEVGM WEPRAENGQK NKRKRDGGEE
201: ETRVVAKVVK TEESHGVEQV ASSLTGIDDW DLTEFLSMPL FSPLSPHPPF GYPQLTVV
101: QREQIPLPQV AAEEKRHYRG VRMRPWGKFA AEIRDPTRRG TRVWLGTFDT AVEAARAYDQ AAFRLRGAKA IVNFPLEVGM WEPRAENGQK NKRKRDGGEE
201: ETRVVAKVVK TEESHGVEQV ASSLTGIDDW DLTEFLSMPL FSPLSPHPPF GYPQLTVV
001: MATPNEVSAL FLIKKYLLDE LSPLPTTATT NRWMNDFTSF DQTGFEFSEF ETKPEIIDLV TPKPEIFDFD VKSEIPSESN DSFTFQSNPP RVTVQSNRKP
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV
101: PLKIAPPNRT KWIQFATGNP KPELPVPVVA AEEKRHYRGV RMRPWGKFAA EIRDPTRRGT RVWLGTFETA IEAARAYDKE AFRLRGSKAI LNFPLEVDKW
201: NPRAEDGRGL YNKRKRDGEE EEVTVVEKVL KTEESYDVSG GENVESGLTA IDDWDLTEFL SMPLLSPLSP HPPFGYPQLT VV
Arabidopsis Description
ERF6Ethylene-responsive transcription factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.