Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU1Hr1G055710.1 Barley nucleus 86.86 84.71
TraesCS1B01G231500.1 Wheat nucleus 90.25 83.2
Zm00001d029940_P001 Maize nucleus 58.47 57.26
OQU92128 Sorghum nucleus 59.32 50.54
TraesCS4A01G416000.1 Wheat nucleus 22.03 42.28
TraesCS1A01G141800.1 Wheat nucleus 21.19 42.02
Bra035732.1-P Field mustard nucleus 34.32 37.33
GSMUA_Achr11P... Banana nucleus 29.66 36.84
CDY05842 Canola nucleus 34.32 36.82
CDX71695 Canola nucleus 34.32 36.82
TraesCS5A01G065400.1 Wheat nucleus 18.22 35.54
AT5G51190.1 Thale cress nucleus 32.2 34.39
VIT_16s0013g01120.t01 Wine grape nucleus, plastid 35.17 34.3
VIT_16s0013g00900.t01 Wine grape nucleus 33.05 34.06
VIT_16s0013g01110.t01 Wine grape nucleus 34.32 33.61
TraesCS4A01G001400.1 Wheat nucleus 18.22 32.82
Solyc03g093560.1.1 Tomato nucleus 33.05 31.97
PGSC0003DMT400090475 Potato nucleus 33.05 31.84
PGSC0003DMT400086995 Potato nucleus 33.05 31.84
PGSC0003DMT400027937 Potato nucleus 33.9 31.62
Solyc03g093550.1.1 Tomato nucleus 32.2 31.54
KRH28164 Soybean nucleus 36.86 31.52
CDY38399 Canola nucleus 34.32 31.4
Bra028690.1-P Field mustard nucleus 24.15 31.32
CDY40779 Canola nucleus 24.15 31.32
KRH77324 Soybean nucleus 36.44 31.27
Solyc03g093540.1.1 Tomato nucleus 29.66 30.7
VIT_16s0013g01000.t01 Wine grape nucleus 34.75 30.6
KRH57483 Soybean nucleus 36.02 30.58
TraesCS2A01G417200.1 Wheat nucleus 42.8 30.06
CDY27922 Canola nucleus 24.15 30.0
VIT_16s0013g01070.t01 Wine grape nucleus 34.75 29.82
KRH04191 Soybean nucleus 34.75 29.82
Bra040158.1-P Field mustard nucleus 33.47 29.7
CDY64966 Canola nucleus 33.47 29.7
CDY42869 Canola nucleus 27.54 29.68
Bra029319.1-P Field mustard nucleus 27.97 29.6
TraesCS2A01G417100.1 Wheat nucleus 43.22 29.57
CDX76570 Canola nucleus 34.75 29.29
VIT_16s0013g01060.t01 Wine grape nucleus 34.32 29.24
VIT_16s0013g00990.t01 Wine grape nucleus 34.32 29.14
CDY14036 Canola nucleus 23.31 29.1
VIT_16s0013g00980.t01 Wine grape nucleus 33.9 29.09
PGSC0003DMT400041327 Potato nucleus 36.44 29.05
CDY67760 Canola nucleus 27.54 28.89
VIT_16s0013g01050.t01 Wine grape nucleus 33.9 28.88
VIT_16s0013g00950.t01 Wine grape nucleus 33.9 28.88
VIT_16s0013g01090.t01 Wine grape nucleus 32.2 28.79
CDY64687 Canola nucleus 34.75 28.57
Bra021049.1-P Field mustard nucleus 33.47 28.11
AT4G17490.1 Thale cress nucleus 33.47 28.01
VIT_16s0013g01030.t01 Wine grape cytosol 13.14 27.93
Solyc05g052030.1.1 Tomato nucleus 23.73 27.86
AT5G61600.1 Thale cress nucleus 28.39 27.8
Bra024953.1-P Field mustard nucleus 34.75 27.8
AT5G47230.1 Thale cress nucleus 35.17 27.67
KRG92180 Soybean nucleus 23.31 27.64
KRG90129 Soybean nucleus 30.93 27.44
KRH34607 Soybean nucleus 23.31 27.36
KRG90130 Soybean nucleus 24.15 27.27
TraesCS6A01G243500.1 Wheat nucleus 36.86 27.19
CDY60497 Canola nucleus 23.73 27.18
PGSC0003DMT400041328 Potato nucleus 23.73 27.18
Bra017493.1-P Field mustard nucleus 33.47 26.87
CDY41042 Canola nucleus 33.05 26.62
AT5G07580.1 Thale cress golgi, nucleus, plastid 23.31 26.57
CDY64666 Canola nucleus 23.73 26.54
Bra009250.1-P Field mustard nucleus 23.73 26.54
CDY25977 Canola nucleus 33.05 26.35
CDY23052 Canola nucleus 28.39 26.17
KRH33376 Soybean nucleus 24.15 25.91
AT5G61590.1 Thale cress nucleus 22.03 25.87
CDX77755 Canola nucleus 33.9 25.81
CDY02130 Canola nucleus 21.61 25.76
CDY23053 Canola nucleus 21.61 25.76
Bra012939.1-P Field mustard nucleus 21.61 25.76
Bra012938.1-P Field mustard nucleus 27.97 25.58
CDY02129 Canola nucleus 27.12 25.5
CDY16811 Canola nucleus 21.61 25.37
KRH33374 Soybean nucleus 30.08 25.27
Bra035919.1-P Field mustard nucleus 21.61 25.12
PGSC0003DMT400067472 Potato nucleus 28.81 24.46
CDX87222 Canola nucleus 20.76 24.38
Solyc08g078190.1.1 Tomato nucleus 32.63 23.91
Solyc05g052040.1.1 Tomato nucleus 36.86 23.84
TraesCS6A01G243300.1 Wheat nucleus 27.12 23.53
TraesCS2A01G417300.1 Wheat nucleus 29.24 23.15
VIT_16s0013g00970.t01 Wine grape nucleus 28.39 21.2
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfncoils:CoilInterPro:DNA-bd_dom_sf
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471
InterPro:IPR036955PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31677PANTHER:PTHR31677:SF43
SMART:SM00380SUPFAM:SSF54171EnsemblPlantsGene:TraesCS1A01G218100EnsemblPlants:TraesCS1A01G218100.1TIGR:cd00018SEG:seg
Description
No Description!
Coordinates
chr1A:-:386479602..386480312
Molecular Weight (calculated)
26383.0 Da
IEP (calculated)
5.434
GRAVY (calculated)
-0.580
Length
236 amino acids
Sequence
(BLAST)
001: MAFTHRHDLD LIRAHLLDDL HADAVALASS GGDSDSSASS PPGWRRPALS LSLPPKLAMT VMEQQPQQES CGYVEGQDEE EDFRRYRGVR LRSWGKFAAE
101: IRDPARKGAR VWLGTYDDAV EAARAYDRAA FRLRGSKAIL NFPNEVGTQS IQWTSPAPLA DTIAAVPTGG KRMRPAQEEE RLREVKKERL QLKEEEEEGA
201: RDADFWEELK VICSLPPLSP LSPYPHFAFP QLSVVS
Best Arabidopsis Sequence Match ( AT5G07580.1 )
(BLAST)
001: MASFEESSDL EAIQSHLLED LLVCDGFMGD FDFDASFVSG LWCIEPHVPK QEPDSPVLDP DSFVNEFLQV EGESSSSSSP ELNSSSSTYE TDQSVKKAER
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF
Arabidopsis Description
ERF106Ethylene-responsive transcription factor ERF106 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY05]
SUBAcon: [golgi,plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.