Factsheet for Bra029319.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000326.1-P
Bra004784.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61600.1	Bra000326.1-P	AT2G43790.1	19416906
AT5G61600.1	Bra004784.1-P	AT2G43790.1	19416906

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42869	Canola	nucleus	97.76	99.54
CDY67760	Canola	nucleus	98.65	97.78
AT5G61600.1	Thale cress	nucleus	77.58	71.78
Bra012938.1-P	Field mustard	nucleus	80.72	69.77
Bra028690.1-P	Field mustard	nucleus	31.84	39.01
Bra027493.1-P	Field mustard	nucleus	22.87	38.64
Bra014925.1-P	Field mustard	nucleus	23.32	37.41
Bra023748.1-P	Field mustard	nucleus	22.87	36.96
Bra015310.1-P	Field mustard	nucleus	21.97	36.57
Bra014924.1-P	Field mustard	nucleus	21.97	35.51
Bra032665.1-P	Field mustard	nucleus	25.11	35.22
Bra032512.1-P	Field mustard	nucleus	21.52	34.78
Bra009250.1-P	Field mustard	nucleus	32.74	34.6
GSMUA_Achr1P00480_001	Banana	nucleus	29.6	33.67
Bra012939.1-P	Field mustard	nucleus	28.7	32.32
Bra035919.1-P	Field mustard	nucleus	29.15	32.02
Bra035732.1-P	Field mustard	nucleus	29.6	30.41
GSMUA_Achr11P...	Banana	nucleus	24.22	28.42
Zm00001d029940_P001	Maize	nucleus	30.49	28.22
HORVU1Hr1G055710.1	Barley	nucleus	30.49	28.1
TraesCS1A01G218100.1	Wheat	nucleus	29.6	27.97
GSMUA_Achr2P10490_001	Banana	nucleus	29.15	27.66
GSMUA_Achr7P06910_001	Banana	nucleus	28.25	26.69
Bra021047.1-P	Field mustard	nucleus	21.52	26.52
TraesCS1B01G231500.1	Wheat	nucleus	30.04	26.17
Bra024954.1-P	Field mustard	nucleus	24.66	25.23
OQU92128	Sorghum	nucleus	30.94	24.91
Bra022115.1-P	Field mustard	nucleus	24.66	24.02
Bra040159.1-P	Field mustard	nucleus	25.11	23.33
Bra017493.1-P	Field mustard	nucleus	30.49	23.13
Bra024953.1-P	Field mustard	nucleus	30.49	23.05
Bra040158.1-P	Field mustard	nucleus	27.35	22.93
Bra021048.1-P	Field mustard	nucleus	25.56	22.44
Bra004873.1-P	Field mustard	nucleus	22.87	21.98
Bra037630.1-P	Field mustard	nucleus	22.87	21.7
Bra023749.1-P	Field mustard	nucleus	11.66	21.67
Bra017495.1-P	Field mustard	nucleus	23.77	21.63
Zm00001d002761_P001	Maize	nucleus	30.49	21.59
Bra021049.1-P	Field mustard	nucleus	26.91	21.35
EES11214	Sorghum	nucleus	26.01	20.35
EES11211	Sorghum	nucleus	29.15	20.12
Os04t0547600-01	Rice	nucleus	29.6	20.12
TraesCS2A01G417200.1	Wheat	nucleus	30.04	19.94
Zm00001d017466_P001	Maize	nucleus	29.15	19.76
KXG26835	Sorghum	nucleus	29.15	19.46
Zm00001d002760_P001	Maize	nucleus	30.94	19.38
TraesCS2B01G436100.1	Wheat	nucleus	29.6	19.35
TraesCS2D01G414300.1	Wheat	nucleus	29.6	19.24
HORVU6Hr1G062430.1	Barley	nucleus	26.01	19.14
TraesCS2A01G417100.1	Wheat	nucleus	29.6	19.13
TraesCS2B01G436200.1	Wheat	nucleus	28.7	19.1
TraesCS2D01G414500.1	Wheat	nucleus	28.7	19.05
KXG26836	Sorghum	nucleus	30.04	18.98
TraesCS6D01G225700.1	Wheat	nucleus	26.46	18.61
TraesCS6B01G280800.1	Wheat	nucleus	26.46	18.55
TraesCS6A01G243500.1	Wheat	nucleus	26.46	18.44
OQU76347	Sorghum	nucleus	24.22	18.24
KXG31094	Sorghum	nucleus	27.8	18.13
Zm00001d051340_P001	Maize	nucleus	27.8	18.13
Os02t0655200-02	Rice	nucleus	26.91	17.44
HORVU2Hr1G098140.2	Barley	mitochondrion, nucleus	18.83	11.73

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra029319	EnsemblPlants:Bra029319.1
EnsemblPlants:Bra029319.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EKK2	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF43	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00025459B3	SEG:seg

Description

AT5G61600 (E=7e-073) ERF104 | ethylene-responsive element-binding family protein

Coordinates

chrA02:+:25877374..25878045

Molecular Weight (calculated)

24835.2 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.683

Length

223 amino acids

Sequence
(BLAST)

001: MATKQEALAI EFISQHLLTD FASQDHHLHS ETTPRTIGNH NPKPNSTLNR RKPPLPNLSV SVSSTMKKPE EEDEEEEKRH YRGVRRRPWG KYAAEIRDPN
101: KKGSRLWLGT YDTAVEAARA YDLAAFELRG RKAILNFPLD VRATSESCFV GLGKRKRLKS FVAEEETVPV RVKAEEKESD TTVAEVEAVP LTPSSWKGVW
201: DVGAGDGIFS VPPLTPTSPS SAT

Best Arabidopsis Sequence Match ( AT5G61600.1 )
(BLAST)

001: MATKQEALAI DFISQHLLTD FVSMETDHPS LFTNQLHNFH SETGPRTITN QSPKPNSTLN QRKPPLPNLS VSRTVSTKTE KEEEERHYRG VRRRPWGKYA
101: AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE
201: PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T

Arabidopsis Description

ERF104Ethylene-responsive transcription factor ERF104 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKG1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.