Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G111300.1 | |
| TraesCS7B01G009200.1 | |
| TraesCS7D01G106400.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | TraesCS7A01G111300.1 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | TraesCS7B01G009200.1 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | TraesCS7D01G106400.1 | AT2G43790.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G414300.1 | Wheat | nucleus | 92.67 | 92.13 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 92.96 | 91.88 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 86.22 | 87.5 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 85.34 | 86.87 |
| Os04t0547600-01 | Rice | nucleus | 60.7 | 63.11 |
| EES11211 | Sorghum | nucleus | 57.77 | 60.99 |
| KXG26835 | Sorghum | nucleus | 59.24 | 60.48 |
| Zm00001d002761_P001 | Maize | nucleus | 55.72 | 60.32 |
| Zm00001d002760_P001 | Maize | nucleus | 59.53 | 57.02 |
| KXG26836 | Sorghum | nucleus | 58.94 | 56.94 |
| EES11214 | Sorghum | nucleus | 46.92 | 56.14 |
| GSMUA_Achr11P... | Banana | nucleus | 26.69 | 47.89 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 44.28 | 47.48 |
| TraesCS1B01G158400.1 | Wheat | nucleus | 15.25 | 43.7 |
| TraesCS4B01G316800.1 | Wheat | nucleus | 15.54 | 43.44 |
| Bra035732.1-P | Field mustard | nucleus | 26.69 | 41.94 |
| CDX71695 | Canola | nucleus | 26.98 | 41.82 |
| CDY05842 | Canola | nucleus | 26.69 | 41.36 |
| AT5G51190.1 | Thale cress | nucleus | 25.51 | 39.37 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 29.33 | 39.06 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 27.27 | 38.43 |
| KRH28164 | Soybean | nucleus | 31.09 | 38.41 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 26.98 | 38.17 |
| TraesCS5B01G072200.1 | Wheat | nucleus | 13.49 | 38.02 |
| KRH77324 | Soybean | nucleus | 30.5 | 37.82 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 25.22 | 37.55 |
| TraesCS6B01G069200.1 | Wheat | nucleus | 13.78 | 37.01 |
| Solyc03g093550.1.1 | Tomato | nucleus | 26.1 | 36.93 |
| TraesCS4B01G001900.1 | Wheat | nucleus | 14.08 | 36.92 |
| OQU76347 | Sorghum | nucleus | 31.96 | 36.82 |
| Solyc03g093540.1.1 | Tomato | nucleus | 24.34 | 36.4 |
| Solyc03g093560.1.1 | Tomato | nucleus | 25.81 | 36.07 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 29.33 | 35.97 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 28.15 | 35.82 |
| PGSC0003DMT400027937 | Potato | nucleus | 26.39 | 35.57 |
| KRH04191 | Soybean | nucleus | 28.45 | 35.27 |
| PGSC0003DMT400090475 | Potato | nucleus | 25.22 | 35.1 |
| PGSC0003DMT400086995 | Potato | nucleus | 25.22 | 35.1 |
| KRH57483 | Soybean | nucleus | 28.15 | 34.53 |
| CDY38399 | Canola | nucleus | 26.1 | 34.5 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 27.57 | 34.18 |
| CDY40779 | Canola | nucleus | 18.18 | 34.07 |
| Bra028690.1-P | Field mustard | nucleus | 18.18 | 34.07 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 27.57 | 33.94 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 27.27 | 33.57 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 26.98 | 33.45 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 10.85 | 33.33 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 26.98 | 33.21 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 25.51 | 32.95 |
| CDY64687 | Canola | nucleus | 27.57 | 32.75 |
| CDY64966 | Canola | nucleus | 25.51 | 32.71 |
| Bra040158.1-P | Field mustard | nucleus | 25.51 | 32.71 |
| CDY27922 | Canola | nucleus | 18.18 | 32.63 |
| CDY14036 | Canola | nucleus | 17.89 | 32.28 |
| Bra024953.1-P | Field mustard | nucleus | 27.57 | 31.86 |
| KRH34607 | Soybean | nucleus | 18.77 | 31.84 |
| CDX76570 | Canola | nucleus | 26.1 | 31.79 |
| PGSC0003DMT400041328 | Potato | nucleus | 19.06 | 31.55 |
| PGSC0003DMT400041327 | Potato | nucleus | 27.27 | 31.42 |
| Solyc05g052030.1.1 | Tomato | nucleus | 18.48 | 31.34 |
| Bra017493.1-P | Field mustard | nucleus | 26.98 | 31.29 |
| KRG92180 | Soybean | nucleus | 18.18 | 31.16 |
| CDY25977 | Canola | nucleus | 26.98 | 31.08 |
| CDY60497 | Canola | nucleus | 18.77 | 31.07 |
| CDY41042 | Canola | nucleus | 26.69 | 31.06 |
| AT5G47230.1 | Thale cress | nucleus | 27.27 | 31.0 |
| Bra021049.1-P | Field mustard | nucleus | 25.51 | 30.96 |
| PGSC0003DMT400067472 | Potato | nucleus | 25.22 | 30.94 |
| KRG90129 | Soybean | nucleus | 24.05 | 30.83 |
| AT4G17490.1 | Thale cress | nucleus | 25.22 | 30.5 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 18.48 | 30.43 |
| Bra009250.1-P | Field mustard | nucleus | 18.77 | 30.33 |
| CDY64666 | Canola | nucleus | 18.77 | 30.33 |
| CDY42869 | Canola | nucleus | 19.35 | 30.14 |
| Solyc08g078190.1.1 | Tomato | nucleus | 28.45 | 30.12 |
| KRG90130 | Soybean | nucleus | 18.18 | 29.67 |
| Bra029319.1-P | Field mustard | nucleus | 19.35 | 29.6 |
| KRH33374 | Soybean | nucleus | 24.34 | 29.54 |
| CDY67760 | Canola | nucleus | 19.35 | 29.33 |
| CDX77755 | Canola | nucleus | 26.39 | 29.03 |
| AT5G61590.1 | Thale cress | nucleus | 17.01 | 28.86 |
| CDY16811 | Canola | nucleus | 17.01 | 28.86 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 22.58 | 28.41 |
| CDY02130 | Canola | nucleus | 16.42 | 28.28 |
| Bra012939.1-P | Field mustard | nucleus | 16.42 | 28.28 |
| Bra035919.1-P | Field mustard | nucleus | 16.72 | 28.08 |
| AT5G61600.1 | Thale cress | nucleus | 19.65 | 27.8 |
| CDY23053 | Canola | nucleus | 16.13 | 27.78 |
| KRH33376 | Soybean | nucleus | 17.89 | 27.73 |
| CDX87222 | Canola | nucleus | 16.13 | 27.36 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 23.17 | 27.24 |
| CDY23052 | Canola | nucleus | 20.23 | 26.95 |
| CDY02129 | Canola | nucleus | 19.65 | 26.69 |
| Bra012938.1-P | Field mustard | nucleus | 19.94 | 26.36 |
| Solyc05g052040.1.1 | Tomato | nucleus | 27.57 | 25.75 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 22.87 | 24.68 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF54 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2B01G436100 | EnsemblPlants:TraesCS2B01G436100.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:-:626650875..626651900
Molecular Weight (calculated)
36253.3 Da
IEP (calculated)
4.813
GRAVY (calculated)
-0.401
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFAGEVDDF ALDLIREHLL GGDGGALATA NHDQAGPFCD DVTFPVLPPS AADPQAYQQQ PMFFPQQGQP EQMQGYMDLT HQYLNSCPSA DVPEAVFRAP
101: EPVMIQFGGE PSPVIAPSST LTISVPAKGS FGWAGTAAAV APPAPAPVED FRKYRGVRQR PWGKYAAEIR DPKRRGSRVW LGTYDTSVEA ARAYDRAAFR
201: MRGAKAILNF PNEVGTRGAE LWAPPPPAPA SKTAGATNTR KRSHEEDPDV EVTGVVINKA PKNEAPSPSS AQVSWDTPSS VSRETASSTV TSAATTPEGG
301: FPPTPSSSGL EQYWEALLGG MPLLSPLSPH PALGFPQLTV S
101: EPVMIQFGGE PSPVIAPSST LTISVPAKGS FGWAGTAAAV APPAPAPVED FRKYRGVRQR PWGKYAAEIR DPKRRGSRVW LGTYDTSVEA ARAYDRAAFR
201: MRGAKAILNF PNEVGTRGAE LWAPPPPAPA SKTAGATNTR KRSHEEDPDV EVTGVVINKA PKNEAPSPSS AQVSWDTPSS VSRETASSTV TSAATTPEGG
301: FPPTPSSSGL EQYWEALLGG MPLLSPLSPH PALGFPQLTV S
001: MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG SSSSSFAPID FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
Arabidopsis Description
ERF5ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.