Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 62.03 | 71.27 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 60.44 | 68.7 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 58.86 | 67.64 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 58.86 | 67.15 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 58.86 | 67.15 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 58.86 | 67.15 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 51.9 | 61.19 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 49.68 | 59.47 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 43.04 | 59.39 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 44.3 | 58.09 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 36.71 | 47.93 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 16.77 | 47.75 |
| VIT_05s0049g00490.t01 | Wine grape | nucleus | 18.35 | 44.62 |
| VIT_07s0005g03210.t01 | Wine grape | nucleus | 18.35 | 40.0 |
| VIT_07s0005g03220.t01 | Wine grape | nucleus | 18.67 | 38.82 |
| VIT_05s0049g00500.t01 | Wine grape | nucleus | 18.04 | 37.5 |
| VIT_07s0005g03190.t01 | Wine grape | nucleus | 18.35 | 37.18 |
| VIT_07s0005g03200.t01 | Wine grape | nucleus | 17.41 | 35.95 |
| VIT_10s0003g00580.t01 | Wine grape | nucleus | 17.41 | 35.95 |
| Solyc03g093540.1.1 | Tomato | nucleus | 25.32 | 35.09 |
| CDY38399 | Canola | nucleus | 28.48 | 34.88 |
| Solyc03g093550.1.1 | Tomato | nucleus | 25.95 | 34.02 |
| Solyc03g093560.1.1 | Tomato | nucleus | 26.27 | 34.02 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 25.32 | 33.9 |
| PGSC0003DMT400086995 | Potato | nucleus | 26.27 | 33.88 |
| PGSC0003DMT400090475 | Potato | nucleus | 26.27 | 33.88 |
| CDY64966 | Canola | nucleus | 28.48 | 33.83 |
| Bra040158.1-P | Field mustard | nucleus | 28.48 | 33.83 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 20.57 | 33.16 |
| KRG90129 | Soybean | nucleus | 27.85 | 33.08 |
| CDX76570 | Canola | nucleus | 29.11 | 32.86 |
| PGSC0003DMT400027937 | Potato | nucleus | 26.27 | 32.81 |
| GSMUA_Achr11P... | Banana | nucleus | 19.62 | 32.63 |
| CDY27922 | Canola | nucleus | 19.62 | 32.63 |
| KRH33374 | Soybean | nucleus | 28.8 | 32.38 |
| AT4G17490.1 | Thale cress | nucleus | 28.8 | 32.27 |
| PGSC0003DMT400041327 | Potato | nucleus | 29.43 | 31.42 |
| Bra021049.1-P | Field mustard | nucleus | 27.85 | 31.32 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 21.84 | 29.36 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 22.47 | 29.34 |
| Zm00001d029940_P001 | Maize | nucleus | 22.15 | 29.05 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 21.2 | 28.39 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 18.04 | 27.8 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 18.04 | 27.54 |
| Solyc05g052040.1.1 | Tomato | nucleus | 31.33 | 27.12 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 18.35 | 27.1 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 21.2 | 26.17 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 16.77 | 25.85 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 24.68 | 25.74 |
| OQU92128 | Sorghum | nucleus | 22.15 | 25.27 |
| Zm00001d017466_P001 | Maize | nucleus | 25.95 | 24.92 |
| EES11211 | Sorghum | nucleus | 25.0 | 24.46 |
| Zm00001d002761_P001 | Maize | nucleus | 24.37 | 24.44 |
| KXG31094 | Sorghum | nucleus | 26.27 | 24.27 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 18.35 | 24.17 |
| KXG26835 | Sorghum | nucleus | 25.32 | 23.95 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 23.73 | 23.66 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 23.73 | 23.58 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 23.73 | 23.44 |
| Zm00001d051340_P001 | Maize | nucleus | 25.32 | 23.39 |
| Os04t0547600-01 | Rice | nucleus | 24.05 | 23.17 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 25.0 | 23.03 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 24.37 | 22.92 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 25.0 | 22.9 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 24.68 | 22.87 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 20.25 | 22.7 |
| EES11214 | Sorghum | nucleus | 20.25 | 22.46 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 23.73 | 22.39 |
| Os02t0655200-02 | Rice | nucleus | 24.37 | 22.38 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 23.42 | 22.02 |
| OQU76347 | Sorghum | nucleus | 20.25 | 21.62 |
| Zm00001d002760_P001 | Maize | nucleus | 22.78 | 20.22 |
| KXG26836 | Sorghum | nucleus | 22.47 | 20.11 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 16.46 | 14.53 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:CBI38597 | ProteinID:CBI38597.3 |
| ncoils:Coil | UniProt:D7U783 | InterPro:DNA-bd_dom_sf | EMBL:FN596738 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0001BE4D39 |
| ArrayExpress:VIT_16s0013g00970 | EnsemblPlantsGene:VIT_16s0013g00970 | EnsemblPlants:VIT_16s0013g00970.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr16:+:6692473..6693594
Molecular Weight (calculated)
35369.0 Da
IEP (calculated)
5.710
GRAVY (calculated)
-0.561
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPPQIKECI YEPYFFQWKE APFPQPGTSS ETSSLYLRCY AQLSSSLHLI HQLLLSDFQS FENLNDPSQT STSDSSVSTS DVIPLSNYFD LHEDENNPFL
101: LHCSTSAPSG FFQFESKSPK ASRLSRRRPP LSISVSQPTI PQLPADSDSG DVKHYRGVRR RPWGKFAAEI RDANRRGSRV WLGTFETAIE AARAYDRAAF
201: EMRGSKAILN FPLEAGNWSG SDPPAISGPK RERESESEER EQVETKVLKQ EEQSPESDST VAGPTRERDG ENIQAATVNA VITTSLVRIF SAYSLRRGCA
301: LTVIIEFVHS FNNSSF
101: LHCSTSAPSG FFQFESKSPK ASRLSRRRPP LSISVSQPTI PQLPADSDSG DVKHYRGVRR RPWGKFAAEI RDANRRGSRV WLGTFETAIE AARAYDRAAF
201: EMRGSKAILN FPLEAGNWSG SDPPAISGPK RERESESEER EQVETKVLKQ EEQSPESDST VAGPTRERDG ENIQAATVNA VITTSLVRIF SAYSLRRGCA
301: LTVIIEFVHS FNNSSF
001: MASSHQQQQE QDQSALDLIT QHLLTDFPSL DTFASTIHHC TTSTLSQRKP PLATIAVPTT APVVQENDQR HYRGVRRRPW GKYAAEIRDP NKKGVRVWLG
101: TFDTAMEAAR GYDKAAFKLR GSKAILNFPL EAGKHEDLGD NKKTISLKAK RKRQVTEDES QLISRKAVKR EEAQVQADAC PLTPSSWKGF WDGADSKDMG
201: IFSVPLLSPC PSLGHSQLVV T
101: TFDTAMEAAR GYDKAAFKLR GSKAILNFPL EAGKHEDLGD NKKTISLKAK RKRQVTEDES QLISRKAVKR EEAQVQADAC PLTPSSWKGF WDGADSKDMG
201: IFSVPLLSPC PSLGHSQLVV T
Arabidopsis Description
ERF105Ethylene-responsive transcription factor ERF105 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY90]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.