Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d036215_P003 | |
| Zm00001d045310_P003 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | Zm00001d036215_P003 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | Zm00001d045310_P003 | AT2G43790.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051340_P001 | Maize | nucleus | 83.28 | 80.12 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 60.18 | 65.35 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 62.01 | 64.35 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 62.01 | 64.15 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 62.01 | 63.75 |
| Os02t0655200-02 | Rice | nucleus | 65.35 | 62.5 |
| Zm00001d002761_P001 | Maize | nucleus | 49.24 | 51.43 |
| GSMUA_Achr11P... | Banana | nucleus | 28.27 | 48.95 |
| Zm00001d002760_P001 | Maize | nucleus | 48.94 | 45.22 |
| Zm00001d029940_P001 | Maize | nucleus | 31.61 | 43.15 |
| Zm00001d027686_P001 | Maize | nucleus | 17.02 | 43.08 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 30.7 | 41.91 |
| Zm00001d049903_P001 | Maize | nucleus | 15.5 | 41.13 |
| Zm00001d014113_P001 | Maize | nucleus | 16.72 | 40.15 |
| Bra035732.1-P | Field mustard | nucleus | 26.14 | 39.63 |
| CDX71695 | Canola | nucleus | 26.44 | 39.55 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 27.36 | 39.3 |
| CDY05842 | Canola | nucleus | 26.14 | 39.09 |
| KRH28164 | Soybean | nucleus | 32.52 | 38.77 |
| Zm00001d005309_P001 | Maize | nucleus | 15.5 | 38.64 |
| KRH77324 | Soybean | nucleus | 32.22 | 38.55 |
| Zm00001d019744_P001 | Maize | nucleus | 15.81 | 38.24 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 27.96 | 38.02 |
| AT5G51190.1 | Thale cress | nucleus | 25.53 | 38.01 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 31.61 | 37.41 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 30.09 | 36.94 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 30.09 | 35.74 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 28.57 | 35.61 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 11.85 | 35.14 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 29.48 | 35.02 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 29.18 | 34.91 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 29.18 | 34.91 |
| KRH04191 | Soybean | nucleus | 29.18 | 34.91 |
| KRH57483 | Soybean | nucleus | 29.18 | 34.53 |
| CDY38399 | Canola | nucleus | 27.05 | 34.5 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 28.88 | 34.3 |
| CDY64966 | Canola | nucleus | 27.36 | 33.83 |
| Bra040158.1-P | Field mustard | nucleus | 27.36 | 33.83 |
| Solyc03g093540.1.1 | Tomato | nucleus | 23.1 | 33.33 |
| Solyc03g093550.1.1 | Tomato | nucleus | 24.32 | 33.2 |
| CDY40779 | Canola | nucleus | 17.93 | 32.42 |
| Bra028690.1-P | Field mustard | nucleus | 17.93 | 32.42 |
| Solyc03g093560.1.1 | Tomato | nucleus | 24.01 | 32.38 |
| AT4G17490.1 | Thale cress | nucleus | 27.66 | 32.27 |
| PGSC0003DMT400090475 | Potato | nucleus | 24.01 | 32.24 |
| CDX76570 | Canola | nucleus | 27.36 | 32.14 |
| CDY27922 | Canola | nucleus | 18.54 | 32.11 |
| CDY64687 | Canola | nucleus | 27.96 | 32.06 |
| PGSC0003DMT400027937 | Potato | nucleus | 24.62 | 32.02 |
| PGSC0003DMT400086995 | Potato | nucleus | 23.71 | 31.84 |
| AT5G47230.1 | Thale cress | nucleus | 28.88 | 31.67 |
| KRG92180 | Soybean | nucleus | 19.15 | 31.66 |
| PGSC0003DMT400067472 | Potato | nucleus | 26.75 | 31.65 |
| KRH34607 | Soybean | nucleus | 19.15 | 31.34 |
| Bra024953.1-P | Field mustard | nucleus | 27.96 | 31.19 |
| CDY25977 | Canola | nucleus | 27.96 | 31.08 |
| CDY41042 | Canola | nucleus | 27.66 | 31.06 |
| Solyc08g078190.1.1 | Tomato | nucleus | 30.4 | 31.06 |
| Bra021049.1-P | Field mustard | nucleus | 26.44 | 30.96 |
| Bra017493.1-P | Field mustard | nucleus | 27.66 | 30.95 |
| KRG90129 | Soybean | nucleus | 24.92 | 30.83 |
| Zm00001d026191_P001 | Maize | nucleus | 24.92 | 30.37 |
| Solyc05g052030.1.1 | Tomato | nucleus | 18.54 | 30.35 |
| CDY14036 | Canola | nucleus | 17.33 | 30.16 |
| CDY60497 | Canola | nucleus | 18.84 | 30.1 |
| PGSC0003DMT400041327 | Potato | nucleus | 26.44 | 29.39 |
| Zm00001d002762_P001 | Maize | nucleus | 24.92 | 29.39 |
| CDY42869 | Canola | nucleus | 19.45 | 29.22 |
| KRH33374 | Soybean | nucleus | 24.92 | 29.18 |
| Bra029319.1-P | Field mustard | nucleus | 19.76 | 29.15 |
| PGSC0003DMT400041328 | Potato | nucleus | 18.24 | 29.13 |
| CDX77755 | Canola | nucleus | 27.36 | 29.03 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 18.24 | 28.99 |
| Bra009250.1-P | Field mustard | nucleus | 18.54 | 28.91 |
| CDY64666 | Canola | nucleus | 18.54 | 28.91 |
| CDY16811 | Canola | nucleus | 17.63 | 28.86 |
| CDY67760 | Canola | nucleus | 19.45 | 28.44 |
| CDX87222 | Canola | nucleus | 17.33 | 28.36 |
| AT5G61590.1 | Thale cress | nucleus | 17.33 | 28.36 |
| KRG90130 | Soybean | nucleus | 17.93 | 28.23 |
| Bra035919.1-P | Field mustard | nucleus | 17.33 | 28.08 |
| CDY02130 | Canola | nucleus | 16.72 | 27.78 |
| CDY23053 | Canola | nucleus | 16.72 | 27.78 |
| Bra012939.1-P | Field mustard | nucleus | 16.72 | 27.78 |
| Zm00001d017462_P001 | Maize | nucleus | 23.71 | 27.66 |
| AT5G61600.1 | Thale cress | nucleus | 19.76 | 26.97 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 24.92 | 25.95 |
| CDY23052 | Canola | nucleus | 20.06 | 25.78 |
| KRH33376 | Soybean | nucleus | 17.02 | 25.45 |
| CDY02129 | Canola | nucleus | 19.15 | 25.1 |
| Bra012938.1-P | Field mustard | nucleus | 19.45 | 24.81 |
| Solyc05g052040.1.1 | Tomato | nucleus | 26.75 | 24.11 |
| Zm00001d027687_P001 | Maize | plastid | 3.95 | 17.57 |
Protein Annotations
| EntrezGene:100384725 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:AQK73214.1 |
| EMBL:BT084056 | UniProt:C4IZQ9 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF54 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0001A4C45F | EnsemblPlantsGene:Zm00001d017466 |
| EnsemblPlants:Zm00001d017466_P001 | EnsemblPlants:Zm00001d017466_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 107Ethylene-responsive transcription factor ERF105
Coordinates
chr5:+:196743195..196744184
Molecular Weight (calculated)
34502.3 Da
IEP (calculated)
6.098
GRAVY (calculated)
-0.256
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSGEIDDF SLQLIREQLL GGEASLPIVT NAAAYSASVV HHPTQAEFHQ PAAFLPQPSH VAYVDLTNEY AADATVASAG GEAAFRAEPV MIRFGGEPSP
101: VSDPSRRPLL TISLPPASHA WGPAAVPLEA PGAAALDAND FRKYRGVRQR PWGKFAAEIR DPKKRGSRVW LGTYDTAIEA ARAYDRAAFR MRGAKAILNF
201: PNEVGTRGAD FLAPPPPPPQ AAATSQNKRK LMHDAEATAT AGAGAGAEPA KSVKAEASGS PASSLSPATT TTPASTVTTC SPSSDAGAGH EMFPVTPSSW
301: TWEQLEGVFG ILSPLSPHPQ LGFPEVTVN
101: VSDPSRRPLL TISLPPASHA WGPAAVPLEA PGAAALDAND FRKYRGVRQR PWGKFAAEIR DPKKRGSRVW LGTYDTAIEA ARAYDRAAFR MRGAKAILNF
201: PNEVGTRGAD FLAPPPPPPQ AAATSQNKRK LMHDAEATAT AGAGAGAEPA KSVKAEASGS PASSLSPATT TTPASTVTTC SPSSDAGAGH EMFPVTPSSW
301: TWEQLEGVFG ILSPLSPHPQ LGFPEVTVN
001: MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG SSSSSFAPID FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
Arabidopsis Description
ERF5ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.