Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra000326.1-P | |
| Bra004784.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | Bra000326.1-P | AT2G43790.1 | 19416906 |
| AT5G61600.1 | Bra004784.1-P | AT2G43790.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02129 | Canola | nucleus | 95.74 | 98.41 |
| AT5G61600.1 | Thale cress | nucleus | 76.74 | 82.16 |
| Bra029319.1-P | Field mustard | nucleus | 69.77 | 80.72 |
| Bra028690.1-P | Field mustard | nucleus | 27.91 | 39.56 |
| Bra027493.1-P | Field mustard | nucleus | 19.38 | 37.88 |
| Bra032665.1-P | Field mustard | nucleus | 22.48 | 36.48 |
| Bra009250.1-P | Field mustard | nucleus | 29.07 | 35.55 |
| Bra014925.1-P | Field mustard | nucleus | 18.99 | 35.25 |
| Bra015310.1-P | Field mustard | nucleus | 18.22 | 35.07 |
| Bra023748.1-P | Field mustard | nucleus | 18.6 | 34.78 |
| Bra014924.1-P | Field mustard | nucleus | 18.22 | 34.06 |
| Bra032512.1-P | Field mustard | nucleus | 18.22 | 34.06 |
| Bra012939.1-P | Field mustard | nucleus | 25.97 | 33.84 |
| Bra035919.1-P | Field mustard | nucleus | 26.36 | 33.5 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 25.19 | 33.16 |
| Bra035732.1-P | Field mustard | nucleus | 25.58 | 30.41 |
| GSMUA_Achr11P... | Banana | nucleus | 21.32 | 28.95 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 26.36 | 28.1 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 25.58 | 27.97 |
| Zm00001d029940_P001 | Maize | nucleus | 25.97 | 27.8 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 25.19 | 27.54 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 24.42 | 26.81 |
| Bra021047.1-P | Field mustard | nucleus | 18.6 | 26.52 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 25.97 | 26.17 |
| OQU92128 | Sorghum | nucleus | 26.36 | 24.55 |
| Bra024954.1-P | Field mustard | nucleus | 20.54 | 24.31 |
| Bra040159.1-P | Field mustard | nucleus | 21.71 | 23.33 |
| Bra022115.1-P | Field mustard | nucleus | 20.54 | 23.14 |
| Bra017493.1-P | Field mustard | nucleus | 26.36 | 23.13 |
| Bra037630.1-P | Field mustard | nucleus | 20.93 | 22.98 |
| Bra004873.1-P | Field mustard | nucleus | 20.54 | 22.84 |
| Bra021048.1-P | Field mustard | nucleus | 22.48 | 22.83 |
| Bra024953.1-P | Field mustard | nucleus | 25.97 | 22.71 |
| Bra040158.1-P | Field mustard | nucleus | 23.26 | 22.56 |
| Bra023749.1-P | Field mustard | nucleus | 10.08 | 21.67 |
| Zm00001d002761_P001 | Maize | nucleus | 26.36 | 21.59 |
| Bra017495.1-P | Field mustard | nucleus | 20.16 | 21.22 |
| Bra021049.1-P | Field mustard | nucleus | 22.87 | 21.0 |
| EES11214 | Sorghum | nucleus | 22.87 | 20.7 |
| Os04t0547600-01 | Rice | nucleus | 25.97 | 20.43 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 26.36 | 20.24 |
| EES11211 | Sorghum | nucleus | 25.19 | 20.12 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 26.36 | 19.94 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 25.58 | 19.7 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 25.97 | 19.53 |
| Zm00001d017466_P001 | Maize | nucleus | 24.81 | 19.45 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 25.97 | 19.42 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 25.19 | 19.35 |
| KXG26836 | Sorghum | nucleus | 26.36 | 19.26 |
| KXG26835 | Sorghum | nucleus | 24.81 | 19.16 |
| Zm00001d002760_P001 | Maize | nucleus | 26.36 | 19.1 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 22.09 | 18.81 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 22.48 | 18.3 |
| OQU76347 | Sorghum | nucleus | 20.93 | 18.24 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 22.48 | 18.24 |
| Zm00001d051340_P001 | Maize | nucleus | 24.03 | 18.13 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 22.48 | 18.12 |
| KXG31094 | Sorghum | nucleus | 23.64 | 17.84 |
| Os02t0655200-02 | Rice | nucleus | 23.26 | 17.44 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 16.67 | 12.01 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra012938 | EnsemblPlants:Bra012938.1 |
| EnsemblPlants:Bra012938.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4D8X8 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002540589 | SEG:seg |
Description
AT5G61600 (E=7e-072) ERF104 | ethylene-responsive element-binding family protein
Coordinates
chrA03:-:21417577..21418353
Molecular Weight (calculated)
28761.5 Da
IEP (calculated)
6.816
GRAVY (calculated)
-0.698
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTKQESLAI EFISQHLLTD FASTETKPSS FTLHETGPSL FTSQVHDYHL ETSPRTINNQ THKPNSTLNR RKPPLPNLSV SRTVSGTVKK TGEEEEERHY
101: RGVRRRPWGK YAAEIRDPNK KGSRIWLGTY DRAVEAARAY DQAAFQLRGR KAILNFPLDV RATSESFLEE GVNGKRKRVK SSPAVEEDEK AVAVRVKVEE
201: EESDTTETTE AEAKAEVEAV PLTPSSWMGF WDVGAGDGIF SVPPLSPTSP NFSVISVT
101: RGVRRRPWGK YAAEIRDPNK KGSRIWLGTY DRAVEAARAY DQAAFQLRGR KAILNFPLDV RATSESFLEE GVNGKRKRVK SSPAVEEDEK AVAVRVKVEE
201: EESDTTETTE AEAKAEVEAV PLTPSSWMGF WDVGAGDGIF SVPPLSPTSP NFSVISVT
001: MATKQEALAI DFISQHLLTD FVSMETDHPS LFTNQLHNFH SETGPRTITN QSPKPNSTLN QRKPPLPNLS VSRTVSTKTE KEEEERHYRG VRRRPWGKYA
101: AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE
201: PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T
101: AEIRDPNKKG CRIWLGTYDT AVEAGRAYDQ AAFQLRGRKA ILNFPLDVRV TSETCSGEGV IGLGKRKRDK GSPPEEEKAA RVKVEEEESN TSETTEAEVE
201: PVVPLTPSSW MGFWDVGAGD GIFSIPPLSP TSPNFSVISV T
Arabidopsis Description
ERF104Ethylene-responsive transcription factor ERF104 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.