Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G111300.1 | |
| TraesCS7B01G009200.1 | |
| TraesCS7D01G106400.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61600.1 | TraesCS7A01G111300.1 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | TraesCS7B01G009200.1 | AT2G43790.1 | 19416906 |
| AT5G61600.1 | TraesCS7D01G106400.1 | AT2G43790.1 | 19416906 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G414300.1 | Wheat | nucleus | 92.46 | 93.0 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 91.88 | 92.96 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 84.93 | 87.2 |
| Os04t0547600-01 | Rice | nucleus | 59.13 | 62.2 |
| EES11211 | Sorghum | nucleus | 57.39 | 61.3 |
| Zm00001d002761_P001 | Maize | nucleus | 55.07 | 60.32 |
| KXG26835 | Sorghum | nucleus | 58.26 | 60.18 |
| KXG26836 | Sorghum | nucleus | 57.97 | 56.66 |
| Zm00001d002760_P001 | Maize | nucleus | 57.68 | 55.9 |
| EES11214 | Sorghum | nucleus | 46.09 | 55.79 |
| GSMUA_Achr11P... | Banana | nucleus | 26.38 | 47.89 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 44.06 | 47.5 |
| TraesCS4A01G416000.1 | Wheat | nucleus | 15.94 | 44.72 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 29.57 | 43.22 |
| TraesCS1A01G141800.1 | Wheat | nucleus | 14.78 | 42.86 |
| Bra035732.1-P | Field mustard | nucleus | 26.38 | 41.94 |
| CDX71695 | Canola | nucleus | 26.67 | 41.82 |
| CDY05842 | Canola | nucleus | 26.38 | 41.36 |
| AT5G51190.1 | Thale cress | nucleus | 25.22 | 39.37 |
| VIT_16s0013g00900.t01 | Wine grape | nucleus | 26.09 | 39.3 |
| VIT_16s0013g01120.t01 | Wine grape | nucleus, plastid | 27.54 | 39.26 |
| VIT_16s0013g01110.t01 | Wine grape | nucleus | 27.25 | 39.0 |
| KRH28164 | Soybean | nucleus | 30.43 | 38.04 |
| TraesCS5A01G065400.1 | Wheat | nucleus | 13.33 | 38.02 |
| KRH77324 | Soybean | nucleus | 29.86 | 37.45 |
| OQU76347 | Sorghum | nucleus | 31.59 | 36.82 |
| VIT_16s0013g00990.t01 | Wine grape | nucleus | 29.57 | 36.69 |
| TraesCS4A01G001400.1 | Wheat | nucleus | 13.91 | 36.64 |
| VIT_16s0013g01000.t01 | Wine grape | nucleus | 28.41 | 36.57 |
| Solyc03g093550.1.1 | Tomato | nucleus | 25.51 | 36.51 |
| Solyc03g093560.1.1 | Tomato | nucleus | 25.51 | 36.07 |
| VIT_16s0013g01030.t01 | Wine grape | cytosol | 11.59 | 36.04 |
| PGSC0003DMT400027937 | Potato | nucleus | 26.38 | 35.97 |
| Solyc03g093540.1.1 | Tomato | nucleus | 23.77 | 35.96 |
| PGSC0003DMT400086995 | Potato | nucleus | 25.22 | 35.51 |
| VIT_16s0013g01060.t01 | Wine grape | nucleus | 28.41 | 35.38 |
| KRH04191 | Soybean | nucleus | 28.12 | 35.27 |
| PGSC0003DMT400090475 | Potato | nucleus | 24.93 | 35.1 |
| VIT_16s0013g01050.t01 | Wine grape | nucleus | 28.12 | 35.02 |
| VIT_16s0013g01070.t01 | Wine grape | nucleus | 27.83 | 34.91 |
| VIT_16s0013g00980.t01 | Wine grape | nucleus | 27.83 | 34.91 |
| CDY38399 | Canola | nucleus | 26.09 | 34.88 |
| VIT_16s0013g00950.t01 | Wine grape | nucleus | 27.83 | 34.66 |
| KRH57483 | Soybean | nucleus | 27.83 | 34.53 |
| VIT_16s0013g01090.t01 | Wine grape | nucleus | 26.38 | 34.47 |
| Bra028690.1-P | Field mustard | nucleus | 17.68 | 33.52 |
| CDY40779 | Canola | nucleus | 17.68 | 33.52 |
| CDY27922 | Canola | nucleus | 18.26 | 33.16 |
| CDY64966 | Canola | nucleus | 25.51 | 33.08 |
| Bra040158.1-P | Field mustard | nucleus | 25.51 | 33.08 |
| CDY14036 | Canola | nucleus | 17.68 | 32.28 |
| CDX76570 | Canola | nucleus | 26.09 | 32.14 |
| CDY64687 | Canola | nucleus | 26.67 | 32.06 |
| PGSC0003DMT400041327 | Potato | nucleus | 26.96 | 31.42 |
| Bra021049.1-P | Field mustard | nucleus | 25.51 | 31.32 |
| PGSC0003DMT400067472 | Potato | nucleus | 25.22 | 31.3 |
| Bra017493.1-P | Field mustard | nucleus | 26.67 | 31.29 |
| Bra024953.1-P | Field mustard | nucleus | 26.67 | 31.19 |
| PGSC0003DMT400041328 | Potato | nucleus | 18.55 | 31.07 |
| CDY41042 | Canola | nucleus | 26.38 | 31.06 |
| AT4G17490.1 | Thale cress | nucleus | 25.22 | 30.85 |
| KRH34607 | Soybean | nucleus | 17.97 | 30.85 |
| Solyc05g052030.1.1 | Tomato | nucleus | 17.97 | 30.85 |
| CDY25977 | Canola | nucleus | 26.38 | 30.74 |
| AT5G47230.1 | Thale cress | nucleus | 26.67 | 30.67 |
| KRG92180 | Soybean | nucleus | 17.68 | 30.65 |
| CDY60497 | Canola | nucleus | 18.26 | 30.58 |
| KRG90129 | Soybean | nucleus | 23.48 | 30.45 |
| CDY42869 | Canola | nucleus | 19.13 | 30.14 |
| Solyc08g078190.1.1 | Tomato | nucleus | 28.12 | 30.12 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 17.97 | 29.95 |
| Bra009250.1-P | Field mustard | nucleus | 18.26 | 29.86 |
| CDY64666 | Canola | nucleus | 18.26 | 29.86 |
| AT5G61590.1 | Thale cress | nucleus | 17.39 | 29.85 |
| Bra029319.1-P | Field mustard | nucleus | 19.13 | 29.6 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 23.19 | 29.41 |
| CDY67760 | Canola | nucleus | 19.13 | 29.33 |
| KRG90130 | Soybean | nucleus | 17.68 | 29.19 |
| KRH33374 | Soybean | nucleus | 23.77 | 29.18 |
| CDX77755 | Canola | nucleus | 26.09 | 29.03 |
| CDY16811 | Canola | nucleus | 16.52 | 28.36 |
| AT5G61600.1 | Thale cress | nucleus | 19.71 | 28.22 |
| CDY02130 | Canola | nucleus | 15.94 | 27.78 |
| Bra012939.1-P | Field mustard | nucleus | 15.94 | 27.78 |
| Bra035919.1-P | Field mustard | nucleus | 16.23 | 27.59 |
| CDY23053 | Canola | nucleus | 15.65 | 27.27 |
| KRH33376 | Soybean | nucleus | 17.39 | 27.27 |
| CDX87222 | Canola | nucleus | 15.65 | 26.87 |
| CDY23052 | Canola | nucleus | 19.71 | 26.56 |
| CDY02129 | Canola | nucleus | 19.13 | 26.29 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 22.61 | 26.17 |
| Bra012938.1-P | Field mustard | nucleus | 19.42 | 25.97 |
| Solyc05g052040.1.1 | Tomato | nucleus | 26.67 | 25.21 |
| VIT_16s0013g00970.t01 | Wine grape | nucleus | 22.9 | 25.0 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF54 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS2A01G417100 | EnsemblPlants:TraesCS2A01G417100.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:-:673194886..673196220
Molecular Weight (calculated)
37027.1 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.487
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFAGEVDDF ALDLIREHLL GGDGGVQATA NHDQAGPFCD DVTFPVLPPS AAEPQAYTQQ PMFFPQQQQQ QQENQQMQAY MDLAHQYLNS CPAADVPETV
101: FRAPEPVMIQ FGGEPSPVTA PSSTLSISVP AKGSFAWAGT AAAAAPPAPA PVEDFRKYRG VRQRPWGKYA AEIRDPKRRG SRVWLGTYDT SVEAARAYDR
201: AAFRMRGAKA ILNFPNEVGT RGAELWAPPP PVPASQTAGA TNKRKRSHED DRDVEVTGVV INKAPKNEAP SPSSAQVSWD TPSSMSRETA SSTVTSAATT
301: PEGGLPPTPS SSGWEQYWEA LLGGMPLLSP LSPHPALGFP QLTVS
101: FRAPEPVMIQ FGGEPSPVTA PSSTLSISVP AKGSFAWAGT AAAAAPPAPA PVEDFRKYRG VRQRPWGKYA AEIRDPKRRG SRVWLGTYDT SVEAARAYDR
201: AAFRMRGAKA ILNFPNEVGT RGAELWAPPP PVPASQTAGA TNKRKRSHED DRDVEVTGVV INKAPKNEAP SPSSAQVSWD TPSSMSRETA SSTVTSAATT
301: PEGGLPPTPS SSGWEQYWEA LLGGMPLLSP LSPHPALGFP QLTVS
001: MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG SSSSSFAPID FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
Arabidopsis Description
ERF5ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.