Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024953.1-P | Field mustard | nucleus | 98.95 | 96.27 |
| CDX77755 | Canola | nucleus | 93.03 | 86.13 |
| CDY25977 | Canola | nucleus | 79.79 | 77.36 |
| CDY41042 | Canola | nucleus | 77.7 | 76.11 |
| AT5G47230.1 | Thale cress | nucleus | 75.26 | 72.0 |
| CDY27922 | Canola | nucleus | 38.33 | 57.89 |
| CDY38399 | Canola | nucleus | 51.92 | 57.75 |
| CDX76570 | Canola | nucleus | 55.75 | 57.14 |
| CDY64966 | Canola | nucleus | 51.92 | 56.02 |
| KRH57483 | Soybean | nucleus | 46.34 | 47.84 |
| KRH04191 | Soybean | nucleus | 45.3 | 47.27 |
| KRH77324 | Soybean | nucleus | 45.3 | 47.27 |
| CDX71695 | Canola | nucleus | 35.19 | 45.91 |
| KRH28164 | Soybean | nucleus | 43.9 | 45.65 |
| CDY05842 | Canola | nucleus | 34.84 | 45.45 |
| CDY50478 | Canola | nucleus | 18.12 | 39.39 |
| CDY32941 | Canola | nucleus | 18.12 | 39.39 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 26.83 | 39.29 |
| CDX77538 | Canola | nucleus | 16.72 | 38.4 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 31.36 | 38.14 |
| GSMUA_Achr11P... | Banana | nucleus | 25.09 | 37.89 |
| CDY18225 | Canola | nucleus | 17.42 | 37.59 |
| CDY60663 | Canola | nucleus | 17.42 | 37.31 |
| CDX85071 | Canola | nucleus | 17.77 | 36.96 |
| CDY35516 | Canola | nucleus | 17.77 | 36.96 |
| CDX77537 | Canola | nucleus | 17.77 | 36.69 |
| CDY10057 | Canola | nucleus | 17.07 | 36.3 |
| CDY53187 | Canola | nucleus | 17.07 | 36.3 |
| Zm00001d029940_P001 | Maize | nucleus | 29.97 | 35.68 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 28.57 | 34.89 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 28.57 | 34.75 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 28.92 | 34.3 |
| CDY40779 | Canola | nucleus | 21.6 | 34.07 |
| CDX85070 | Canola | nucleus | 16.38 | 34.06 |
| CDY14036 | Canola | nucleus | 21.95 | 33.33 |
| CDX76569 | Canola | nucleus | 20.56 | 32.78 |
| CDY38052 | Canola | nucleus | 18.82 | 32.53 |
| CDY33523 | Canola | nucleus | 24.04 | 31.94 |
| OQU92128 | Sorghum | nucleus | 30.66 | 31.77 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 28.22 | 31.64 |
| CDX77750 | Canola | nucleus | 24.04 | 31.08 |
| CDY60497 | Canola | nucleus | 21.95 | 30.58 |
| CDY42869 | Canola | nucleus | 23.0 | 30.14 |
| CDY38401 | Canola | nucleus | 23.69 | 29.96 |
| CDY64666 | Canola | nucleus | 21.95 | 29.86 |
| Zm00001d002761_P001 | Maize | nucleus | 32.75 | 29.84 |
| CDY23053 | Canola | nucleus | 20.56 | 29.8 |
| CDY02130 | Canola | nucleus | 20.56 | 29.8 |
| CDY67760 | Canola | nucleus | 23.34 | 29.78 |
| CDY16811 | Canola | nucleus | 20.56 | 29.35 |
| Os04t0547600-01 | Rice | nucleus | 33.1 | 28.96 |
| CDY68787 | Canola | nucleus | 22.65 | 28.89 |
| CDY28965 | Canola | nucleus | 23.0 | 28.7 |
| CDY43434 | Canola | nucleus | 22.65 | 28.51 |
| EES11211 | Sorghum | nucleus | 32.06 | 28.48 |
| CDY65883 | Canola | nucleus | 22.3 | 28.44 |
| CDX87222 | Canola | nucleus | 19.86 | 28.36 |
| CDY25978 | Canola | nucleus | 23.69 | 28.33 |
| Zm00001d002760_P001 | Maize | nucleus | 34.84 | 28.09 |
| EES11214 | Sorghum | nucleus | 27.87 | 28.07 |
| Zm00001d017466_P001 | Maize | nucleus | 32.06 | 27.96 |
| CDY27923 | Canola | nucleus | 24.74 | 27.84 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 32.75 | 27.57 |
| CDY23052 | Canola | nucleus | 24.39 | 27.34 |
| KXG26835 | Sorghum | nucleus | 31.71 | 27.25 |
| KXG26836 | Sorghum | nucleus | 33.45 | 27.2 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 32.4 | 27.11 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 31.71 | 27.08 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 28.57 | 27.06 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 31.36 | 26.87 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 32.06 | 26.67 |
| KXG31094 | Sorghum | nucleus | 31.71 | 26.61 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 31.01 | 26.49 |
| CDY02129 | Canola | nucleus | 23.0 | 26.29 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 28.57 | 25.87 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 28.57 | 25.79 |
| Zm00001d051340_P001 | Maize | nucleus | 30.66 | 25.73 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 28.57 | 25.62 |
| Os02t0655200-02 | Rice | nucleus | 30.31 | 25.29 |
| CDY35515 | Canola | nucleus | 13.94 | 25.0 |
| CDY08986 | Canola | nucleus | 18.12 | 24.53 |
| OQU76347 | Sorghum | nucleus | 24.04 | 23.31 |
| CDX74692 | Canola | nucleus | 17.07 | 21.12 |
| CDY56473 | Canola | nucleus | 16.72 | 20.78 |
| CDY30489 | Canola | nucleus | 16.72 | 20.69 |
| CDY23459 | Canola | nucleus | 16.38 | 19.83 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 23.69 | 18.99 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078JGZ1 | UniProt:A0A078JGZ1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY64687 | ProteinID:CDY64687 | ProteinID:CDY64687.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00042551001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE0862 | SEG:seg | : | : | : | : |
Description
BnaA06g40170DBnaA06g40170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGZ1]
Coordinates
chrLK034521:-:25486..26443
Molecular Weight (calculated)
32380.8 Da
IEP (calculated)
5.009
GRAVY (calculated)
-0.624
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPSEVSSA LWFIEKHLLD VVSPVAKDCW MVHESAANES SSDSSPMIFG PSSEIKPEII DLSTPRFMDL ISNVSVSDFD FKPTFQTGNQ FEPEFKTQTP
101: CASDDSHSNR KPPLKISVPT KTEWIQFNPQ PEVTKPVQPD AEEQRHYRGV RQRPWGKFAS EIRDPNKRGS RIWLGTFDTA IEAARAYDEA AFRLRGSKAI
201: LNFPLEVGKW KSRSNADGEK KRKREENDDE DVAVVEKALK TEQSVDGKEA FNLTEFCEWD VTGLLNFPLL SPLSPHPSFG YSQLTVV
101: CASDDSHSNR KPPLKISVPT KTEWIQFNPQ PEVTKPVQPD AEEQRHYRGV RQRPWGKFAS EIRDPNKRGS RIWLGTFDTA IEAARAYDEA AFRLRGSKAI
201: LNFPLEVGKW KSRSNADGEK KRKREENDDE DVAVVEKALK TEQSVDGKEA FNLTEFCEWD VTGLLNFPLL SPLSPHPSFG YSQLTVV
001: MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG SSSSSFAPID FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
101: PSNQNQNQFE PELKSQIRKP PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR VWLGTFDTAI EAARAYDEAA
201: FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV
Arabidopsis Description
ERF5ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.