Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • plastid 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G218100.1 Wheat nucleus 83.2 90.25
HORVU1Hr1G055710.1 Barley nucleus 83.59 88.43
Zm00001d029940_P001 Maize nucleus 53.91 57.26
OQU92128 Sorghum nucleus 56.64 52.35
TraesCS1B01G158400.1 Wheat nucleus 19.92 42.86
TraesCS4B01G316800.1 Wheat nucleus 19.92 41.8
GSMUA_Achr11P... Banana nucleus 27.73 37.37
Bra035732.1-P Field mustard nucleus 31.64 37.33
TraesCS6B01G069200.1 Wheat nucleus 18.36 37.01
CDY05842 Canola nucleus 31.64 36.82
CDX71695 Canola nucleus 31.25 36.36
TraesCS5B01G072200.1 Wheat nucleus 17.19 36.36
VIT_16s0013g01120.t01 Wine grape nucleus, plastid 33.2 35.12
AT5G51190.1 Thale cress nucleus 30.08 34.84
VIT_16s0013g01110.t01 Wine grape nucleus 32.03 34.02
TraesCS4B01G001900.1 Wheat nucleus 17.19 33.85
VIT_16s0013g00900.t01 Wine grape nucleus 29.3 32.75
Bra028690.1-P Field mustard nucleus 23.05 32.42
CDY40779 Canola nucleus 23.05 32.42
CDY38399 Canola nucleus 32.42 32.17
VIT_16s0013g01000.t01 Wine grape nucleus 33.59 32.09
KRH77324 Soybean nucleus 34.38 32.0
KRH28164 Soybean nucleus 34.38 31.88
PGSC0003DMT400090475 Potato nucleus 30.47 31.84
PGSC0003DMT400086995 Potato nucleus 30.47 31.84
Solyc03g093560.1.1 Tomato nucleus 30.08 31.56
TraesCS2B01G436200.1 Wheat nucleus 41.02 31.34
PGSC0003DMT400027937 Potato nucleus 30.86 31.23
Solyc03g093550.1.1 Tomato nucleus 28.91 30.71
KRH57483 Soybean nucleus 33.2 30.58
Bra040158.1-P Field mustard nucleus 31.64 30.45
CDY64966 Canola nucleus 31.64 30.45
CDY42869 Canola nucleus 25.78 30.14
Bra029319.1-P Field mustard nucleus 26.17 30.04
CDY27922 Canola nucleus 22.27 30.0
Solyc03g093540.1.1 Tomato nucleus 26.56 29.82
KRH04191 Soybean nucleus 32.03 29.82
CDX76570 Canola nucleus 32.42 29.64
CDY14036 Canola nucleus 21.88 29.63
CDY67760 Canola nucleus 25.78 29.33
TraesCS2B01G436100.1 Wheat nucleus 39.06 29.33
VIT_16s0013g01090.t01 Wine grape nucleus 30.08 29.17
VIT_16s0013g01070.t01 Wine grape nucleus 31.25 29.09
VIT_16s0013g01060.t01 Wine grape nucleus 31.25 28.88
Solyc05g052030.1.1 Tomato nucleus 22.66 28.86
VIT_16s0013g00990.t01 Wine grape nucleus 31.25 28.78
VIT_16s0013g00980.t01 Wine grape nucleus 30.86 28.73
KRG90130 Soybean nucleus 23.44 28.71
KRG92180 Soybean nucleus 22.27 28.64
TraesCS6B01G280800.1 Wheat nucleus 35.55 28.62
VIT_16s0013g01050.t01 Wine grape nucleus 30.86 28.52
VIT_16s0013g00950.t01 Wine grape nucleus 30.86 28.52
PGSC0003DMT400041327 Potato nucleus 32.81 28.38
AT4G17490.1 Thale cress nucleus 31.25 28.37
KRH34607 Soybean nucleus 22.27 28.36
CDY64687 Canola nucleus 31.64 28.22
PGSC0003DMT400041328 Potato nucleus 22.66 28.16
CDY60497 Canola nucleus 22.66 28.16
Bra021049.1-P Field mustard nucleus 30.86 28.11
AT5G47230.1 Thale cress nucleus 32.81 28.0
AT5G61600.1 Thale cress nucleus 26.17 27.8
AT5G07580.1 Thale cress golgi, nucleus, plastid 22.27 27.54
Bra009250.1-P Field mustard nucleus 22.66 27.49
CDY64666 Canola nucleus 22.66 27.49
Bra024953.1-P Field mustard nucleus 31.64 27.46
KRG90129 Soybean nucleus 28.52 27.44
KRH33376 Soybean nucleus 23.44 27.27
VIT_16s0013g01030.t01 Wine grape cytosol 11.72 27.03
Bra017493.1-P Field mustard nucleus 30.86 26.87
CDY41042 Canola nucleus 30.47 26.62
CDY23052 Canola nucleus 26.56 26.56
AT5G61590.1 Thale cress nucleus 20.7 26.37
CDY25977 Canola nucleus 30.47 26.35
CDY02129 Canola nucleus 25.78 26.29
CDY02130 Canola nucleus 20.31 26.26
Bra012939.1-P Field mustard nucleus 20.31 26.26
CDY23053 Canola nucleus 20.31 26.26
Bra012938.1-P Field mustard nucleus 26.17 25.97
CDY16811 Canola nucleus 20.31 25.87
CDX77755 Canola nucleus 31.25 25.81
Bra035919.1-P Field mustard nucleus 20.31 25.62
KRH33374 Soybean nucleus 27.34 24.91
CDX87222 Canola nucleus 19.53 24.88
PGSC0003DMT400067472 Potato nucleus 26.95 24.82
Solyc08g078190.1.1 Tomato nucleus 30.47 24.22
TraesCS2B01G436300.1 Wheat nucleus 26.95 23.79
Solyc05g052040.1.1 Tomato nucleus 33.2 23.29
TraesCS6B01G281000.1 Wheat nucleus 23.83 22.51
VIT_16s0013g00970.t01 Wine grape nucleus 26.17 21.2
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31677PANTHER:PTHR31677:SF43SMART:SM00380
SUPFAM:SSF54171EnsemblPlantsGene:TraesCS1B01G231500EnsemblPlants:TraesCS1B01G231500.1TIGR:cd00018SEG:seg:
Description
No Description!
Coordinates
chr1B:-:415743802..415744572
Molecular Weight (calculated)
28053.9 Da
IEP (calculated)
6.367
GRAVY (calculated)
-0.504
Length
256 amino acids
Sequence
(BLAST)
001: MAFTHRHLDL IRAHLLDDLH ADALASSSGD SDSSPSSPPG WRRPALSVSL PPKPARTVLE RQPQQESCGY VEGQEEYDDD FRRYRGVRLR PWGKFAAEIR
101: DPARKGARVW LGTYDDAVEA ARAYDCAAFR LRGPKAILNF PNEVGTQSIQ WTSPAPLADT IAAVPTGGKR MRPAQEEERL RVVKKERLQL KEDDDEGAIA
201: ANYSAAGGGA PASWDGVAAA RDADIWEGLK VICSLPPLSP LSPYPHFAFP QLSVVN
Best Arabidopsis Sequence Match ( AT5G51190.1 )
(BLAST)
001: MASSHQQQQE QDQSALDLIT QHLLTDFPSL DTFASTIHHC TTSTLSQRKP PLATIAVPTT APVVQENDQR HYRGVRRRPW GKYAAEIRDP NKKGVRVWLG
101: TFDTAMEAAR GYDKAAFKLR GSKAILNFPL EAGKHEDLGD NKKTISLKAK RKRQVTEDES QLISRKAVKR EEAQVQADAC PLTPSSWKGF WDGADSKDMG
201: IFSVPLLSPC PSLGHSQLVV T
Arabidopsis Description
ERF105Ethylene-responsive transcription factor ERF105 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY90]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.