Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40779 | Canola | nucleus | 88.89 | 92.31 |
| CDY60497 | Canola | nucleus | 80.95 | 74.27 |
| CDY64666 | Canola | nucleus | 81.48 | 72.99 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 77.78 | 71.01 |
| CDY02130 | Canola | nucleus | 62.96 | 60.1 |
| CDY23053 | Canola | nucleus | 62.43 | 59.6 |
| CDY16811 | Canola | nucleus | 62.96 | 59.2 |
| CDX87222 | Canola | nucleus | 60.32 | 56.72 |
| Solyc05g052030.1.1 | Tomato | nucleus | 40.74 | 38.31 |
| KRG92180 | Soybean | nucleus | 40.21 | 38.19 |
| CDX77538 | Canola | nucleus | 24.87 | 37.6 |
| PGSC0003DMT400041328 | Potato | nucleus | 40.74 | 37.38 |
| KRH34607 | Soybean | nucleus | 39.68 | 37.31 |
| CDX85071 | Canola | nucleus | 26.45 | 36.23 |
| CDX77537 | Canola | nucleus | 26.45 | 35.97 |
| CDY32941 | Canola | nucleus | 24.87 | 35.61 |
| CDY50478 | Canola | nucleus | 24.87 | 35.61 |
| CDY53187 | Canola | nucleus | 25.4 | 35.56 |
| CDY10057 | Canola | nucleus | 25.4 | 35.56 |
| CDY35516 | Canola | nucleus | 25.93 | 35.51 |
| KRG90130 | Soybean | nucleus | 39.15 | 35.41 |
| CDY18225 | Canola | nucleus | 24.87 | 35.34 |
| CDY60663 | Canola | nucleus | 24.87 | 35.07 |
| CDY42869 | Canola | nucleus | 38.1 | 32.88 |
| KRH33376 | Soybean | nucleus | 38.1 | 32.73 |
| CDX85070 | Canola | nucleus | 23.81 | 32.61 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 33.33 | 32.14 |
| CDY67760 | Canola | nucleus | 38.1 | 32.0 |
| CDY38052 | Canola | nucleus | 28.04 | 31.93 |
| CDX71695 | Canola | nucleus | 33.86 | 29.09 |
| CDY23052 | Canola | nucleus | 39.15 | 28.91 |
| CDY02129 | Canola | nucleus | 38.1 | 28.69 |
| CDY05842 | Canola | nucleus | 33.33 | 28.64 |
| CDX76569 | Canola | nucleus | 25.4 | 26.67 |
| CDY38401 | Canola | nucleus | 30.16 | 25.11 |
| CDY33523 | Canola | nucleus | 28.57 | 25.0 |
| CDY65883 | Canola | nucleus | 29.63 | 24.89 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 30.69 | 24.68 |
| CDX77750 | Canola | nucleus | 28.57 | 24.32 |
| GSMUA_Achr11P... | Banana | nucleus | 24.34 | 24.21 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 30.16 | 24.15 |
| CDY38399 | Canola | nucleus | 32.8 | 24.03 |
| CDY43434 | Canola | nucleus | 28.57 | 23.68 |
| CDY68787 | Canola | nucleus | 28.04 | 23.56 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 29.1 | 23.31 |
| Zm00001d029940_P001 | Maize | nucleus | 29.63 | 23.24 |
| CDY08986 | Canola | nucleus | 25.93 | 23.11 |
| CDY28965 | Canola | nucleus | 28.04 | 23.04 |
| CDY25978 | Canola | nucleus | 29.1 | 22.92 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 29.1 | 22.73 |
| CDY27923 | Canola | nucleus | 30.16 | 22.35 |
| CDY64966 | Canola | nucleus | 31.22 | 22.18 |
| CDX76570 | Canola | nucleus | 32.8 | 22.14 |
| CDY64687 | Canola | nucleus | 33.33 | 21.95 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 29.63 | 21.88 |
| CDX74692 | Canola | nucleus | 26.45 | 21.55 |
| CDY41042 | Canola | nucleus | 33.33 | 21.5 |
| CDY25977 | Canola | nucleus | 33.33 | 21.28 |
| CDY56473 | Canola | nucleus | 25.93 | 21.21 |
| CDY30489 | Canola | nucleus | 25.4 | 20.69 |
| CDY35515 | Canola | nucleus | 17.46 | 20.62 |
| OQU92128 | Sorghum | nucleus | 30.16 | 20.58 |
| CDY27922 | Canola | nucleus | 20.63 | 20.53 |
| CDX77755 | Canola | nucleus | 33.33 | 20.32 |
| CDY23459 | Canola | nucleus | 25.4 | 20.25 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 32.28 | 18.15 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 32.28 | 17.89 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 28.57 | 17.82 |
| Zm00001d002761_P001 | Maize | nucleus | 29.63 | 17.78 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 32.28 | 17.68 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 31.75 | 17.49 |
| EES11211 | Sorghum | nucleus | 29.63 | 17.34 |
| Zm00001d017466_P001 | Maize | nucleus | 30.16 | 17.33 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 30.69 | 17.31 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 29.1 | 17.3 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 30.69 | 17.26 |
| Os04t0547600-01 | Rice | nucleus | 29.63 | 17.07 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 28.57 | 17.03 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 28.57 | 16.88 |
| Zm00001d002760_P001 | Maize | nucleus | 31.75 | 16.85 |
| KXG26835 | Sorghum | nucleus | 29.63 | 16.77 |
| KXG31094 | Sorghum | nucleus | 30.16 | 16.67 |
| Zm00001d051340_P001 | Maize | nucleus | 30.16 | 16.67 |
| KXG26836 | Sorghum | nucleus | 30.69 | 16.43 |
| OQU76347 | Sorghum | nucleus | 25.4 | 16.22 |
| EES11214 | Sorghum | nucleus | 24.34 | 16.14 |
| Os02t0655200-02 | Rice | nucleus | 28.57 | 15.7 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 18.52 | 9.78 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FLW0 | UniProt:A0A078FLW0 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY14036 | ProteinID:CDY14036 | ProteinID:CDY14036.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00078562001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EABF95 | SEG:seg | : | : | : | : |
Description
BnaC02g01530DBnaC02g01530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLW0]
Coordinates
chrLK032040:-:88601..89285
Molecular Weight (calculated)
21217.4 Da
IEP (calculated)
6.146
GRAVY (calculated)
-0.921
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFEESSDL DAIQKHLFED FMVSDSFMGD FDFDASCVSG LWCIEPAMNQ VPKQEPDSSS AHETDQTVST KKKSKGRFHE EEEEQRHYRG VRRRAWGKFA
101: AEIRDPGKKG SRVWLGTFES GVDAARAYDC AAFKLRGRKA VLNFPLDAGK YEAPANSGRR RKRSDAKEEL QRSQGNSSSS SIDGETTCE
101: AEIRDPGKKG SRVWLGTFES GVDAARAYDC AAFKLRGRKA VLNFPLDAGK YEAPANSGRR RKRSDAKEEL QRSQGNSSSS SIDGETTCE
001: MASFEESSDL EAIQSHLLED LLVCDGFMGD FDFDASFVSG LWCIEPHVPK QEPDSPVLDP DSFVNEFLQV EGESSSSSSP ELNSSSSTYE TDQSVKKAER
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF
Arabidopsis Description
ERF106Ethylene-responsive transcription factor ERF106 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY05]
SUBAcon: [golgi,plastid,nucleus]
SUBAcon: [golgi,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.