Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g052030.1.1 | Tomato | nucleus | 94.17 | 96.52 |
| KRG92180 | Soybean | nucleus | 42.23 | 43.72 |
| KRG90130 | Soybean | nucleus | 43.69 | 43.06 |
| Bra028690.1-P | Field mustard | nucleus | 37.86 | 42.86 |
| CDY40779 | Canola | nucleus | 37.86 | 42.86 |
| KRH34607 | Soybean | nucleus | 40.78 | 41.79 |
| AT5G61590.1 | Thale cress | nucleus | 40.29 | 41.29 |
| CDY16811 | Canola | nucleus | 40.29 | 41.29 |
| CDY02130 | Canola | nucleus | 39.32 | 40.91 |
| Bra012939.1-P | Field mustard | nucleus | 39.32 | 40.91 |
| CDY14036 | Canola | nucleus | 37.38 | 40.74 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 40.78 | 40.58 |
| CDY23053 | Canola | nucleus | 38.84 | 40.4 |
| Bra035919.1-P | Field mustard | nucleus | 39.81 | 40.39 |
| CDX87222 | Canola | nucleus | 39.32 | 40.3 |
| CDY60497 | Canola | nucleus | 39.32 | 39.32 |
| KRH33376 | Soybean | nucleus | 41.75 | 39.09 |
| CDY64666 | Canola | nucleus | 39.32 | 38.39 |
| Bra009250.1-P | Field mustard | nucleus | 39.32 | 38.39 |
| PGSC0003DMT400034871 | Potato | nucleus | 22.33 | 36.8 |
| PGSC0003DMT400044383 | Potato | nucleus | 24.27 | 35.97 |
| PGSC0003DMT400097075 | Potato | nucleus | 24.27 | 34.25 |
| PGSC0003DMT400026678 | Potato | nucleus | 24.76 | 32.48 |
| PGSC0003DMT400091474 | Potato | nucleus | 27.67 | 31.67 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 29.61 | 31.12 |
| PGSC0003DMT400034984 | Potato | nucleus | 21.84 | 28.66 |
| PGSC0003DMT400067020 | Potato | nucleus | 27.67 | 28.22 |
| GSMUA_Achr11P... | Banana | nucleus | 25.24 | 27.37 |
| PGSC0003DMT400005836 | Potato | nucleus | 26.21 | 27.14 |
| PGSC0003DMT400067534 | Potato | nucleus | 30.1 | 26.61 |
| PGSC0003DMT400067018 | Potato | nucleus | 28.64 | 26.11 |
| PGSC0003DMT400027937 | Potato | nucleus | 32.04 | 26.09 |
| PGSC0003DMT400067535 | Potato | nucleus | 29.61 | 26.07 |
| PGSC0003DMT400097101 | Potato | nucleus | 27.67 | 26.03 |
| PGSC0003DMT400018085 | Potato | nucleus | 23.79 | 25.93 |
| PGSC0003DMT400027849 | Potato | nucleus | 22.82 | 25.82 |
| PGSC0003DMT400086995 | Potato | nucleus | 30.58 | 25.71 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 29.13 | 25.42 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 28.64 | 25.11 |
| PGSC0003DMT400090475 | Potato | nucleus | 29.61 | 24.9 |
| PGSC0003DMT400066853 | Potato | nucleus | 20.87 | 24.86 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 27.18 | 23.73 |
| PGSC0003DMT400067013 | Potato | nucleus | 26.21 | 23.68 |
| Zm00001d029940_P001 | Maize | nucleus | 27.67 | 23.65 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 27.67 | 23.55 |
| PGSC0003DMT400091002 | Potato | nucleus | 24.76 | 23.39 |
| PGSC0003DMT400041331 | Potato | nucleus | 25.73 | 23.04 |
| PGSC0003DMT400066846 | Potato | nucleus | 24.76 | 22.97 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 28.16 | 22.66 |
| PGSC0003DMT400027932 | Potato | nucleus | 25.73 | 21.46 |
| OQU92128 | Sorghum | nucleus | 28.16 | 20.94 |
| PGSC0003DMT400041327 | Potato | nucleus | 29.61 | 20.61 |
| PGSC0003DMT400067472 | Potato | nucleus | 26.7 | 19.78 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 31.55 | 19.35 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 28.16 | 19.14 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 31.55 | 19.06 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 31.55 | 18.95 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 30.58 | 18.81 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 30.58 | 18.75 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 31.07 | 18.55 |
| Os04t0547600-01 | Rice | nucleus | 29.13 | 18.29 |
| Zm00001d017466_P001 | Maize | nucleus | 29.13 | 18.24 |
| Zm00001d002761_P001 | Maize | nucleus | 27.67 | 18.1 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 27.67 | 17.98 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 27.67 | 17.92 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 27.67 | 17.81 |
| KXG26835 | Sorghum | nucleus | 28.64 | 17.66 |
| Zm00001d051340_P001 | Maize | nucleus | 29.13 | 17.54 |
| KXG31094 | Sorghum | nucleus | 29.13 | 17.54 |
| KXG26836 | Sorghum | nucleus | 29.61 | 17.28 |
| EES11214 | Sorghum | nucleus | 23.79 | 17.19 |
| Os02t0655200-02 | Rice | nucleus | 28.16 | 16.86 |
| Zm00001d002760_P001 | Maize | nucleus | 29.13 | 16.85 |
| EES11211 | Sorghum | nucleus | 26.21 | 16.72 |
| OQU76347 | Sorghum | nucleus | 23.3 | 16.22 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 18.93 | 10.89 |
Protein Annotations
| EntrezGene:102588222 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | ProteinID:AEM63547 | ProteinID:AEM63547.2 | ProteinID:AFV07576 |
| ProteinID:AFV07576.1 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EMBL:JN125861 |
| EMBL:JX428802 | UniProt:M1BB76 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400016004 | PGSC:PGSC0003DMG400016004 | EnsemblPlants:PGSC0003DMT400041328 |
| PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI00029577AB | RefSeq:XP_006365343.1 | SEG:seg | : | : |
Description
Ethylene response factor 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400016004]
Coordinates
chr5:-:47293160..47294004
Molecular Weight (calculated)
23115.9 Da
IEP (calculated)
8.203
GRAVY (calculated)
-0.758
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKQDEGLTL ELIRQHLLED FTTTESFINS LNSCFSDQIS SSSDISPVFT SVKTEPSTSN SLSDSPNSSY PNEPNSPISR YFNLHSDFPE FKIDSDTILS
101: PVSDSSAGSN EDNNKKKNYR GVRRRPWGKF AAEIRDPSRK GSRIWLGTFD TDMDAARAYD CAAFKMRGRK AILNFPLDAG KSGAPANIGR KRRRENKMEL
201: VEMINL
101: PVSDSSAGSN EDNNKKKNYR GVRRRPWGKF AAEIRDPSRK GSRIWLGTFD TDMDAARAYD CAAFKMRGRK AILNFPLDAG KSGAPANIGR KRRRENKMEL
201: VEMINL
001: MASFEESSDL EAIQSHLLED LLVCDGFMGD FDFDASFVSG LWCIEPHVPK QEPDSPVLDP DSFVNEFLQV EGESSSSSSP ELNSSSSTYE TDQSVKKAER
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF
Arabidopsis Description
ERF106Ethylene-responsive transcription factor ERF106 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY05]
SUBAcon: [golgi,plastid,nucleus]
SUBAcon: [golgi,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.