Factsheet for Bra009250.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64666	Canola	nucleus	100.0	100.0
CDY60497	Canola	nucleus	96.21	98.54
Bra028690.1-P	Field mustard	nucleus	74.88	86.81
AT5G07580.1	Thale cress	golgi, nucleus, plastid	82.46	84.06
Bra012939.1-P	Field mustard	nucleus	65.88	70.2
Bra035919.1-P	Field mustard	nucleus	65.4	67.98
KRG92180	Soybean	nucleus	38.86	41.21
KRH34607	Soybean	nucleus	38.86	40.8
Solyc05g052030.1.1	Tomato	nucleus	38.39	40.3
PGSC0003DMT400041328	Potato	nucleus	38.39	39.32
KRG90130	Soybean	nucleus	36.97	37.32
Bra027493.1-P	Field mustard	nucleus	22.75	36.36
Bra023748.1-P	Field mustard	nucleus	23.7	36.23
Bra014925.1-P	Field mustard	nucleus	23.7	35.97
Bra015310.1-P	Field mustard	nucleus	22.27	35.07
Bra032512.1-P	Field mustard	nucleus	22.75	34.78
GSMUA_Achr1P00480_001	Banana	nucleus	31.28	33.67
KRH33376	Soybean	nucleus	35.07	33.64
Bra014924.1-P	Field mustard	nucleus	21.8	33.33
Bra032665.1-P	Field mustard	nucleus	25.12	33.33
Bra029319.1-P	Field mustard	nucleus	34.6	32.74
Bra035732.1-P	Field mustard	nucleus	30.33	29.49
Bra012938.1-P	Field mustard	nucleus	35.55	29.07
Bra021047.1-P	Field mustard	nucleus	23.7	27.62
GSMUA_Achr11P...	Banana	nucleus	24.64	27.37
GSMUA_Achr2P10490_001	Banana	nucleus	29.86	26.81
Bra024954.1-P	Field mustard	nucleus	27.01	26.15
Bra022115.1-P	Field mustard	nucleus	27.49	25.33
GSMUA_Achr7P06910_001	Banana	nucleus	27.96	25.0
Bra040159.1-P	Field mustard	nucleus	28.44	25.0
Bra021048.1-P	Field mustard	nucleus	29.86	24.8
Bra017495.1-P	Field mustard	nucleus	28.44	24.49
Zm00001d029940_P001	Maize	nucleus	27.49	24.07
TraesCS1A01G218100.1	Wheat	nucleus	26.54	23.73
HORVU1Hr1G055710.1	Barley	nucleus	27.01	23.55
TraesCS1B01G231500.1	Wheat	nucleus	27.49	22.66
Bra040158.1-P	Field mustard	nucleus	27.96	22.18
Bra004873.1-P	Field mustard	nucleus	24.17	21.98
Bra017493.1-P	Field mustard	nucleus	30.33	21.77
Bra024953.1-P	Field mustard	nucleus	29.86	21.36
OQU92128	Sorghum	nucleus	27.96	21.3
Bra037630.1-P	Field mustard	nucleus	23.22	20.85
Bra021049.1-P	Field mustard	nucleus	27.49	20.64
HORVU6Hr1G062430.1	Barley	nucleus	27.49	19.14
TraesCS2B01G436100.1	Wheat	nucleus	30.33	18.77
TraesCS2A01G417200.1	Wheat	nucleus	29.86	18.75
Zm00001d002761_P001	Maize	nucleus	27.96	18.73
Os04t0547600-01	Rice	nucleus	28.91	18.6
TraesCS6B01G280800.1	Wheat	nucleus	27.96	18.55
Zm00001d017466_P001	Maize	nucleus	28.91	18.54
TraesCS2B01G436200.1	Wheat	nucleus	29.38	18.51
TraesCS2D01G414500.1	Wheat	nucleus	29.38	18.45
TraesCS2D01G414300.1	Wheat	nucleus	29.86	18.37
Bra023749.1-P	Field mustard	nucleus	10.43	18.33
TraesCS6D01G225700.1	Wheat	nucleus	27.49	18.3
EES11211	Sorghum	nucleus	27.96	18.27
KXG26835	Sorghum	nucleus	28.91	18.26
TraesCS2A01G417100.1	Wheat	nucleus	29.86	18.26
TraesCS6A01G243500.1	Wheat	nucleus	27.49	18.12
Zm00001d002760_P001	Maize	nucleus	30.33	17.98
KXG26836	Sorghum	nucleus	29.38	17.56
Zm00001d051340_P001	Maize	nucleus	28.44	17.54
KXG31094	Sorghum	nucleus	28.44	17.54
OQU76347	Sorghum	nucleus	23.7	16.89
Os02t0655200-02	Rice	nucleus	27.01	16.57
EES11214	Sorghum	nucleus	21.8	16.14
HORVU2Hr1G098140.2	Barley	mitochondrion, nucleus	18.01	10.61

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra009250	EnsemblPlants:Bra009250.1
EnsemblPlants:Bra009250.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CYF3	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF43	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00025453A1	SEG:seg

Description

AT5G07580 (E=4e-083) | DNA binding / transcription factor

Coordinates

chrA10:-:15830948..15831583

Molecular Weight (calculated)

23709.3 Da

IEP (calculated)

4.672

GRAVY (calculated)

-0.768

Length

211 amino acids

Sequence
(BLAST)

001: MAAFEESSDL DAIQEHLLED FLVADGFMGD FDFNASFVSG LWCIEPVMNQ VPKQEPDSPV LDPDSFVKEF LQVEVESSTS TGVSEQNSSP HETDQSVSPR
101: KEAKRLEEEE EPRHYRGVRR RPWGKFAAEI RDPAKKGSRI WLGTFESNVD AARAYDCAAF KLRGRKAVLN FPLDAGKYEA PVNSGRKRKR SDVQEELQRS
201: QSNSSSSSSD L

Best Arabidopsis Sequence Match ( AT5G07580.1 )
(BLAST)

001: MASFEESSDL EAIQSHLLED LLVCDGFMGD FDFDASFVSG LWCIEPHVPK QEPDSPVLDP DSFVNEFLQV EGESSSSSSP ELNSSSSTYE TDQSVKKAER
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF

Arabidopsis Description

ERF106Ethylene-responsive transcription factor ERF106 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY05]
SUBAcon: [golgi,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.