Factsheet for Bra037630.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30489	Canola	nucleus	96.6	97.84
CDY23459	Canola	nucleus	96.17	95.36
Bra004873.1-P	Field mustard	nucleus	83.4	84.48
AT2G44840.1	Thale cress	nucleus	77.45	80.53
Bra032665.1-P	Field mustard	nucleus	30.64	45.28
PGSC0003DMT400091474	Potato	nucleus	31.49	41.11
Bra014925.1-P	Field mustard	nucleus	23.4	39.57
Solyc01g090310.2.1	Tomato	nucleus	30.21	39.44
Bra023748.1-P	Field mustard	nucleus	22.98	39.13
Bra021047.1-P	Field mustard	nucleus	29.36	38.12
VIT_16s0013g00890.t01	Wine grape	nucleus	38.3	37.5
Bra027493.1-P	Field mustard	nucleus	20.85	37.12
Bra015310.1-P	Field mustard	nucleus	20.85	36.57
Bra032512.1-P	Field mustard	nucleus	21.28	36.23
Bra014924.1-P	Field mustard	nucleus	20.43	34.78
Bra040159.1-P	Field mustard	nucleus	34.89	34.17
PGSC0003DMT400067020	Potato	nucleus	29.36	34.16
Solyc01g090300.2.1	Tomato	nucleus	29.36	34.16
Bra024954.1-P	Field mustard	nucleus	31.49	33.95
Bra021048.1-P	Field mustard	nucleus	36.6	33.86
PGSC0003DMT400066853	Potato	nucleus	24.68	33.53
Solyc01g090320.2.1	Tomato	nucleus	25.96	32.8
Bra022115.1-P	Field mustard	nucleus	31.49	32.31
PGSC0003DMT400018085	Potato	nucleus	25.96	32.28
Solyc05g050790.1.1	Tomato	nucleus	25.96	32.28
GSMUA_Achr11P...	Banana	nucleus	36.17	31.72
Solyc01g090370.1.1	Tomato	nucleus	29.79	31.67
PGSC0003DMT400091002	Potato	nucleus	29.36	31.65
Bra017495.1-P	Field mustard	nucleus	31.91	30.61
TraesCS2D01G414600.1	Wheat	nucleus	37.45	30.45
TraesCS2B01G436300.1	Wheat	nucleus	37.45	30.34
PGSC0003DMT400067013	Potato	nucleus	29.36	30.26
GSMUA_Achr1P00490_001	Banana	nucleus	26.38	30.24
TraesCS2A01G417300.1	Wheat	nucleus	37.87	29.87
Zm00001d017462_P001	Maize	nucleus	35.74	29.79
TraesCS6B01G281000.1	Wheat	nucleus	34.04	29.52
TraesCS6A01G243300.1	Wheat	nucleus	34.04	29.41
Solyc01g090340.2.1	Tomato	nucleus	27.23	29.22
PGSC0003DMT400097101	Potato	nucleus	27.23	29.22
PGSC0003DMT400066846	Potato	nucleus	27.23	28.83
PGSC0003DMT400067018	Potato	nucleus	27.66	28.76
TraesCS6D01G225500.1	Wheat	nucleus	33.19	28.57
Zm00001d026191_P001	Maize	nucleus	32.77	28.52
Zm00001d002762_P001	Maize	nucleus	33.62	28.32
EES05793	Sorghum	nucleus	36.6	27.65
OQU82076	Sorghum	nucleus	34.04	27.3
HORVU6Hr1G062380.3	Barley	nucleus	34.89	27.15
Os02t0654700-01	Rice	nucleus	34.89	27.06
Bra028690.1-P	Field mustard	nucleus	20.85	26.92
Os04t0546800-01	Rice	nucleus	34.89	25.79
GSMUA_Achr5P21050_001	Banana	nucleus	35.74	25.38
Bra035919.1-P	Field mustard	nucleus	21.28	24.63
Bra035732.1-P	Field mustard	nucleus	22.13	23.96
Bra012939.1-P	Field mustard	nucleus	20.0	23.74
Bra009250.1-P	Field mustard	nucleus	20.85	23.22
Bra029319.1-P	Field mustard	nucleus	21.7	22.87
Bra023749.1-P	Field mustard	nucleus	11.06	21.67
Bra012938.1-P	Field mustard	nucleus	22.98	20.93
Bra040158.1-P	Field mustard	nucleus	21.28	18.8
Bra017493.1-P	Field mustard	nucleus	22.55	18.03
Bra021049.1-P	Field mustard	nucleus	20.85	17.44
Bra024953.1-P	Field mustard	nucleus	20.85	16.61

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra037630
EnsemblPlants:Bra037630.1	EnsemblPlants:Bra037630.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4F967	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF75	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002544087	SEG:seg	:	:	:	:

Description

AT2G44840 (E=4e-077) ATERF13, EREBP, ERF13 | ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13); DNA binding / transcription factor

Coordinates

chrA04:+:18417234..18417941

Molecular Weight (calculated)

25913.0 Da

IEP (calculated)

5.118

GRAVY (calculated)

-0.554

Length

235 amino acids

Sequence
(BLAST)

001: MSGFDYSDLT SSADSVTNGV NPPVFYRNPS FSNVILNDSW SDLPLSVDDS QDMAIYNTLR DAFSSGWTPA VPPPAVAEEV KPTTATATAA ASGSRAPARQ
101: KGMQYRGVRR RPWGKFAAEI RDPKKNGARV WLGTYETPED AAVAYDRAAF QLKGSKAKLN FPHLIGTCEY EPVRIRPRRR SPEPSVSDYS SPEQKSVGHV
201: EEGESSFVVP ELGFTVDQLY SDGSYLMDQS SYLYF

Best Arabidopsis Sequence Match ( AT2G44840.1 )
(BLAST)

001: MSSSDSVNNG VNSRMYFRNP SFSNVILNDN WSDLPLSVDD SQDMAIYNTL RDAVSSGWTP SVPPVTSPAE ENKPPATKAS GSHAPRQKGM QYRGVRRRPW
101: GKFAAEIRDP KKNGARVWLG TYETPEDAAV AYDRAAFQLR GSKAKLNFPH LIGSCKYEPV RIRPRRRSPE PSVSDQLTSE QKRESHVDDG ESSLVVPELD
201: FTVDQFYFDG SLLMDQSECS YSDNRI

Arabidopsis Description

ERF13Ethylene-responsive transcription factor 13 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.