Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G225500.1 | Wheat | nucleus | 84.11 | 93.04 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 83.11 | 92.28 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 82.45 | 91.88 |
| Zm00001d017462_P001 | Maize | nucleus | 70.86 | 75.89 |
| EES05793 | Sorghum | nucleus | 74.5 | 72.35 |
| Os02t0654700-01 | Rice | nucleus | 72.52 | 72.28 |
| Zm00001d026191_P001 | Maize | nucleus | 59.93 | 67.04 |
| Zm00001d002762_P001 | Maize | nucleus | 61.26 | 66.31 |
| OQU82076 | Sorghum | nucleus | 63.91 | 65.87 |
| KRG92185 | Soybean | nucleus | 17.55 | 58.24 |
| GSMUA_Achr11P... | Banana | nucleus | 45.7 | 51.49 |
| Bra021047.1-P | Field mustard | nucleus | 28.81 | 48.07 |
| CDX76569 | Canola | nucleus | 27.81 | 46.67 |
| PGSC0003DMT400041331 | Potato | nucleus | 35.1 | 46.09 |
| PGSC0003DMT400027932 | Potato | nucleus | 36.76 | 44.94 |
| CDY38401 | Canola | nucleus | 33.77 | 44.93 |
| Solyc03g093610.1.1 | Tomato | nucleus | 35.76 | 44.63 |
| KRH04192 | Soybean | nucleus | 37.09 | 44.62 |
| VIT_16s0013g00890.t01 | Wine grape | nucleus | 35.43 | 44.58 |
| Solyc05g052050.1.1 | Tomato | nucleus | 34.44 | 44.44 |
| KRH57484 | Soybean | nucleus | 37.42 | 44.31 |
| CDY43434 | Canola | nucleus | 33.44 | 44.3 |
| CDY33523 | Canola | nucleus | 31.46 | 43.98 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 41.06 | 43.97 |
| KRH28165 | Soybean | nucleus | 39.07 | 43.87 |
| CDX77750 | Canola | nucleus | 31.79 | 43.24 |
| PGSC0003DMT400005836 | Potato | nucleus | 28.48 | 43.22 |
| CDY65883 | Canola | nucleus | 32.12 | 43.11 |
| KRH77323 | Soybean | nucleus | 39.07 | 43.07 |
| Solyc08g007230.1.1 | Tomato | nucleus | 28.15 | 42.71 |
| Bra024954.1-P | Field mustard | nucleus | 30.79 | 42.66 |
| VIT_15s0021g01630.t01 | Wine grape | nucleus | 30.13 | 42.52 |
| VIT_15s0021g01610.t01 | Wine grape | nucleus | 29.14 | 42.51 |
| CDY25978 | Canola | nucleus | 33.77 | 42.5 |
| VIT_15s0021g01590.t01 | Wine grape | nucleus | 28.81 | 42.44 |
| VIT_15s0021g01600.t01 | Wine grape | nucleus | 28.81 | 42.44 |
| CDY68787 | Canola | nucleus | 31.46 | 42.22 |
| KRH66522 | Soybean | nucleus | 27.15 | 42.05 |
| Bra040159.1-P | Field mustard | nucleus | 33.11 | 41.67 |
| Bra022115.1-P | Field mustard | nucleus | 31.46 | 41.48 |
| Bra021048.1-P | Field mustard | nucleus | 34.77 | 41.34 |
| CDY28965 | Canola | nucleus | 31.46 | 41.3 |
| Bra017495.1-P | Field mustard | nucleus | 33.44 | 41.22 |
| PGSC0003DMT400067534 | Potato | nucleus | 31.79 | 41.2 |
| CDY27923 | Canola | nucleus | 34.77 | 41.18 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 44.7 | 40.79 |
| AT5G47220.1 | Thale cress | nucleus | 32.45 | 40.33 |
| Bra032665.1-P | Field mustard | nucleus | 21.19 | 40.25 |
| Solyc08g078170.1.1 | Tomato | nucleus | 31.13 | 39.66 |
| Solyc08g078180.1.1 | Tomato | nucleus | 30.46 | 39.32 |
| AT4G17500.1 | Thale cress | nucleus | 34.77 | 39.18 |
| CDY38052 | Canola | nucleus | 21.52 | 39.16 |
| PGSC0003DMT400067535 | Potato | nucleus | 30.13 | 38.89 |
| KRH48809 | Soybean | nucleus | 19.54 | 38.06 |
| HORVU5Hr1G017540.1 | Barley | nucleus | 15.56 | 37.3 |
| KRH01076 | Soybean | nucleus | 24.5 | 36.63 |
| KRH66533 | Soybean | nucleus | 18.21 | 36.42 |
| KRH01077 | Soybean | nucleus | 25.17 | 36.02 |
| KRH40171 | Soybean | nucleus | 24.17 | 35.96 |
| AT2G44840.1 | Thale cress | nucleus | 26.82 | 35.84 |
| HORVU4Hr1G000960.1 | Barley | nucleus | 15.89 | 35.82 |
| CDY30489 | Canola | nucleus | 27.48 | 35.78 |
| HORVU4Hr1G080300.1 | Barley | nucleus | 14.57 | 35.77 |
| HORVU1Hr1G037530.1 | Barley | nucleus | 14.57 | 35.77 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 24.17 | 35.61 |
| CDX74692 | Canola | nucleus | 27.15 | 35.34 |
| Bra004873.1-P | Field mustard | nucleus | 27.15 | 35.34 |
| HORVU0Hr1G010370.3 | Barley | nucleus | 15.56 | 35.34 |
| CDY56473 | Canola | nucleus | 26.82 | 35.06 |
| Bra037630.1-P | Field mustard | nucleus | 27.15 | 34.89 |
| CDY23459 | Canola | nucleus | 26.82 | 34.18 |
| KRH01075 | Soybean | nucleus | 18.54 | 34.15 |
| KRH48815 | Soybean | nucleus | 26.82 | 33.75 |
| PGSC0003DMT400091474 | Potato | nucleus | 19.87 | 33.33 |
| Solyc01g090310.2.1 | Tomato | nucleus | 19.87 | 33.33 |
| KRH48811 | Soybean | nucleus | 22.19 | 32.68 |
| KRH66529 | Soybean | nucleus | 20.2 | 32.28 |
| Solyc01g090320.2.1 | Tomato | nucleus | 19.87 | 32.26 |
| PGSC0003DMT400066846 | Potato | nucleus | 23.51 | 31.98 |
| KRH66532 | Soybean | nucleus | 23.51 | 31.84 |
| PGSC0003DMT400091002 | Potato | nucleus | 22.52 | 31.19 |
| PGSC0003DMT400067020 | Potato | nucleus | 20.86 | 31.19 |
| Solyc01g090340.2.1 | Tomato | nucleus | 22.52 | 31.05 |
| Solyc01g090300.2.1 | Tomato | nucleus | 20.53 | 30.69 |
| KRH66525 | Soybean | nucleus | 19.87 | 30.46 |
| PGSC0003DMT400018085 | Potato | nucleus | 18.87 | 30.16 |
| PGSC0003DMT400066853 | Potato | nucleus | 17.22 | 30.06 |
| Solyc05g050790.1.1 | Tomato | nucleus | 18.21 | 29.1 |
| PGSC0003DMT400067018 | Potato | nucleus | 21.52 | 28.76 |
| Solyc01g090370.1.1 | Tomato | nucleus | 20.86 | 28.51 |
| PGSC0003DMT400097101 | Potato | nucleus | 20.53 | 28.31 |
| KRH66526 | Soybean | nucleus | 18.21 | 27.92 |
| PGSC0003DMT400067013 | Potato | nucleus | 20.86 | 27.63 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 21.85 | 27.27 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 24.5 | 24.42 |
| KRH66523 | Soybean | nucleus | 13.24 | 23.81 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 17.55 | 14.8 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A287UE74 | EMBL:AK368341 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU6Hr1G062380 |
| EnsemblPlants:HORVU6Hr1G062380.3 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF65 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000B474ED3 | SEG:seg |
Description
No Description!
Coordinates
chrchr6H:+:417994395..417995987
Molecular Weight (calculated)
31843.3 Da
IEP (calculated)
5.013
GRAVY (calculated)
-0.252
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: PLTREFEEQT QIILGPNATT PDKMLLLNPA VEAAVLDSIR QQLLEEPTAP ARPAYCRSAS FGSLVADQWS ESLPFRPNDA DDMVVYGALR DAFSCGWLPD
101: GSFAAVKPEP LPSPDPYDGS CLGSFLASPG PATPDEAAST ATWTEEAEVA ATASRGRHFR GVRQRPWGKF AAEIRDPAKN GARVWLGTFD SAEDAAVAYD
201: RAAYRMRGSR ALLNFPLRIG SEIAAAAAAA GQKRASPEPA SSDSASPSSS APGSSKRRKR GEAAAASMAM ALVPPTPVQA PVQLILPAQP WLATGAVQQL
301: VS
101: GSFAAVKPEP LPSPDPYDGS CLGSFLASPG PATPDEAAST ATWTEEAEVA ATASRGRHFR GVRQRPWGKF AAEIRDPAKN GARVWLGTFD SAEDAAVAYD
201: RAAYRMRGSR ALLNFPLRIG SEIAAAAAAA GQKRASPEPA SSDSASPSSS APGSSKRRKR GEAAAASMAM ALVPPTPVQA PVQLILPAQP WLATGAVQQL
301: VS
001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL
Arabidopsis Description
ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.