CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66522	Soybean	nucleus	62.08	76.41
KRG92185	Soybean	nucleus	22.08	58.24
KRH21338	Soybean	nucleus	24.58	40.14
KRH48809	Soybean	nucleus	25.83	40.0
KRH66523	Soybean	nucleus	27.92	39.88
Bra032665.1-P	Field mustard	nucleus	26.25	39.62
KRH66533	Soybean	nucleus	24.58	39.07
CDY38052	Canola	nucleus	26.67	38.55
KRG95653	Soybean	nucleus	19.58	37.9
PGSC0003DMT400091474	Potato	nucleus	27.5	36.67
KRG92310	Soybean	nucleus	20.42	36.57
KRH12208	Soybean	nucleus	18.33	36.36
KRH31710	Soybean	nucleus	20.42	35.77
KRH34484	Soybean	nucleus	20.83	35.46
KRH37227	Soybean	nucleus	17.92	35.25
Solyc01g090310.2.1	Tomato	nucleus	26.25	35.0
VIT_16s0013g00890.t01	Wine grape	nucleus	35.0	35.0
PGSC0003DMT400067020	Potato	nucleus	29.17	34.65
Solyc01g090300.2.1	Tomato	nucleus	28.75	34.16
KRH57484	Soybean	nucleus	36.25	34.12
KRH34485	Soybean	nucleus	20.83	34.01
KRH04192	Soybean	nucleus	35.42	33.86
KRG92309	Soybean	nucleus	20.42	33.33
KRH19547	Soybean	nucleus	19.17	33.33
KRH12207	Soybean	nucleus	18.33	33.33
KRH32175	Soybean	nucleus	18.75	32.85
KRH37228	Soybean	nucleus	18.75	32.85
KRH28165	Soybean	nucleus	36.67	32.71
KRH66525	Soybean	nucleus	26.67	32.49
KRH01075	Soybean	nucleus	22.08	32.32
KRH66532	Soybean	nucleus	29.58	31.84
PGSC0003DMT400066853	Potato	nucleus	22.92	31.79
KRH77323	Soybean	nucleus	36.25	31.75
KRH66529	Soybean	nucleus	25.0	31.75
KRH48811	Soybean	nucleus	27.08	31.71
PGSC0003DMT400018085	Potato	nucleus	24.58	31.22
GSMUA_Achr11P...	Banana	nucleus	34.58	30.97
TraesCS6A01G243300.1	Wheat	nucleus	35.0	30.88
Zm00001d026191_P001	Maize	nucleus	34.58	30.74
GSMUA_Achr1P00490_001	Banana	nucleus	26.25	30.73
KRH66526	Soybean	nucleus	25.0	30.46
KRH69131	Soybean	nucleus	21.25	30.36
KRH01077	Soybean	nucleus	26.67	30.33
KRH01076	Soybean	nucleus	25.42	30.2
Solyc01g090320.2.1	Tomato	nucleus	23.33	30.11
KRH67370	Soybean	nucleus	19.17	30.07
TraesCS6B01G281000.1	Wheat	nucleus	33.75	29.89
PGSC0003DMT400091002	Potato	nucleus	27.08	29.82
Os02t0654700-01	Rice	nucleus	37.5	29.7
TraesCS6D01G225500.1	Wheat	nucleus	33.75	29.67
KRH37226	Soybean	nucleus	14.58	29.66
KRH40171	Soybean	nucleus	25.0	29.56
KRH32179	Soybean	nucleus	19.17	29.11
Solyc05g050790.1.1	Tomato	nucleus	22.92	29.1
Zm00001d017462_P001	Maize	nucleus	34.17	29.08
TraesCS2D01G414600.1	Wheat	nucleus	35.0	29.07
TraesCS2B01G436300.1	Wheat	nucleus	35.0	28.97
Solyc01g090370.1.1	Tomato	nucleus	26.67	28.96
TraesCS2A01G417300.1	Wheat	nucleus	35.83	28.86
PGSC0003DMT400067018	Potato	nucleus	27.08	28.76
KRH19552	Soybean	nucleus	18.33	28.76
Zm00001d002762_P001	Maize	nucleus	33.33	28.67
OQU82076	Sorghum	nucleus	34.58	28.33
PGSC0003DMT400067013	Potato	nucleus	26.67	28.07
EES05793	Sorghum	nucleus	36.25	27.97
PGSC0003DMT400097101	Potato	nucleus	25.42	27.85
Solyc01g090340.2.1	Tomato	nucleus	25.0	27.4
PGSC0003DMT400066846	Potato	nucleus	25.0	27.03
KRH34607	Soybean	nucleus	22.5	26.87
HORVU6Hr1G062380.3	Barley	nucleus	33.75	26.82
Os04t0546800-01	Rice	nucleus	33.33	25.16
KRG92180	Soybean	nucleus	20.83	25.13
GSMUA_Achr5P21050_001	Banana	nucleus	33.33	24.17
KRG90130	Soybean	nucleus	20.83	23.92
KRH10962	Soybean	nucleus	26.25	23.33
KRH33376	Soybean	nucleus	20.83	22.73
KRH33374	Soybean	nucleus	24.58	21.0
KRG90129	Soybean	nucleus	22.92	20.68
KRH77324	Soybean	nucleus	22.92	20.0
KRH28164	Soybean	nucleus	22.5	19.57
KRH04191	Soybean	nucleus	22.08	19.27
KRH57483	Soybean	nucleus	22.08	19.06

Protein Annotations

EntrezGene:100804762	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02004287	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_07G114300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7L174	EnsemblPlants:KRH48815	ProteinID:KRH48815	ProteinID:KRH48815.1
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF75	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI000233809A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:11951756..11952478

Molecular Weight (calculated)

26367.3 Da

IEP (calculated)

10.396

GRAVY (calculated)

-0.440

Length

240 amino acids

Sequence
(BLAST)

001: MSPHALNTNV NALHDIGLPV STPFKDASAS VPSTAVFGRN SSFRNIFLAK NWAELPLKED NAEDMVIYGV LREAATMGWL PANGNGVSKV GMAVKMENES
101: QNSDKAAACG THVPPRRGLS FRGVRRRPWG KYAAEIRDAK RNGVRVWLGT YETAENAALA YDRAAFKMHG SKAKLNFPHL IASAHHHVEP IRIALKKHSF
201: DVSLSSSEVA AKRSKNGTAS TNLELNDSNM LQFPMDNRWQ

Best Arabidopsis Sequence Match ( AT2G44840.1 )
(BLAST)

001: MSSSDSVNNG VNSRMYFRNP SFSNVILNDN WSDLPLSVDD SQDMAIYNTL RDAVSSGWTP SVPPVTSPAE ENKPPATKAS GSHAPRQKGM QYRGVRRRPW
101: GKFAAEIRDP KKNGARVWLG TYETPEDAAV AYDRAAFQLR GSKAKLNFPH LIGSCKYEPV RIRPRRRSPE PSVSDQLTSE QKRESHVDDG ESSLVVPELD
201: FTVDQFYFDG SLLMDQSECS YSDNRI

Arabidopsis Description

ERF13Ethylene-responsive transcription factor 13 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9K1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.