Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022115.1-P | Field mustard | nucleus | 97.83 | 98.25 |
| CDY68787 | Canola | nucleus | 94.35 | 96.44 |
| CDX77750 | Canola | nucleus | 75.22 | 77.93 |
| CDY33523 | Canola | nucleus | 72.61 | 77.31 |
| CDY25978 | Canola | nucleus | 79.13 | 75.83 |
| CDY43434 | Canola | nucleus | 74.35 | 75.0 |
| AT5G47220.1 | Thale cress | nucleus | 75.22 | 71.19 |
| CDY38401 | Canola | nucleus | 60.87 | 61.67 |
| CDY65883 | Canola | nucleus | 59.13 | 60.44 |
| CDX76569 | Canola | nucleus | 46.96 | 60.0 |
| CDY27923 | Canola | nucleus | 64.35 | 58.04 |
| KRH04192 | Soybean | nucleus | 53.91 | 49.4 |
| KRH57484 | Soybean | nucleus | 53.48 | 48.24 |
| KRH77323 | Soybean | nucleus | 56.52 | 47.45 |
| KRH28165 | Soybean | nucleus | 54.35 | 46.47 |
| VIT_02s0234g00130.t01 | Wine grape | nucleus | 53.48 | 43.62 |
| CDX77538 | Canola | nucleus | 22.61 | 41.6 |
| CDX77537 | Canola | nucleus | 24.35 | 40.29 |
| CDY10057 | Canola | nucleus | 23.48 | 40.0 |
| CDY53187 | Canola | nucleus | 23.48 | 40.0 |
| CDX85071 | Canola | nucleus | 23.91 | 39.86 |
| CDY18225 | Canola | nucleus | 23.04 | 39.85 |
| CDY60663 | Canola | nucleus | 23.04 | 39.55 |
| CDY32941 | Canola | nucleus | 22.61 | 39.39 |
| CDY50478 | Canola | nucleus | 22.61 | 39.39 |
| CDY38052 | Canola | nucleus | 27.83 | 38.55 |
| CDY35516 | Canola | nucleus | 23.04 | 38.41 |
| GSMUA_Achr11P... | Banana | nucleus | 42.17 | 36.19 |
| GSMUA_Achr1P00490_001 | Banana | nucleus | 31.74 | 35.61 |
| CDX85070 | Canola | nucleus | 21.3 | 35.51 |
| TraesCS6B01G281000.1 | Wheat | nucleus | 41.74 | 35.42 |
| TraesCS6A01G243300.1 | Wheat | nucleus | 41.74 | 35.29 |
| Zm00001d026191_P001 | Maize | nucleus | 41.3 | 35.19 |
| TraesCS6D01G225500.1 | Wheat | nucleus | 41.74 | 35.16 |
| TraesCS2D01G414600.1 | Wheat | nucleus | 43.91 | 34.95 |
| TraesCS2B01G436300.1 | Wheat | nucleus | 43.91 | 34.83 |
| Zm00001d002762_P001 | Maize | nucleus | 42.17 | 34.77 |
| TraesCS2A01G417300.1 | Wheat | nucleus | 43.48 | 33.56 |
| Os02t0654700-01 | Rice | nucleus | 43.91 | 33.33 |
| OQU82076 | Sorghum | nucleus | 41.74 | 32.76 |
| Zm00001d017462_P001 | Maize | nucleus | 40.0 | 32.62 |
| CDY30489 | Canola | nucleus | 32.61 | 32.33 |
| CDX74692 | Canola | nucleus | 32.61 | 32.33 |
| CDY56473 | Canola | nucleus | 32.17 | 32.03 |
| HORVU6Hr1G062380.3 | Barley | nucleus | 41.3 | 31.46 |
| CDY23459 | Canola | nucleus | 32.17 | 31.22 |
| EES05793 | Sorghum | nucleus | 42.17 | 31.19 |
| Os04t0546800-01 | Rice | nucleus | 41.74 | 30.19 |
| GSMUA_Achr5P21050_001 | Banana | nucleus | 43.04 | 29.91 |
| CDY40779 | Canola | nucleus | 23.48 | 29.67 |
| CDY16811 | Canola | nucleus | 24.78 | 28.36 |
| CDY23053 | Canola | nucleus | 24.35 | 28.28 |
| CDY60497 | Canola | nucleus | 25.22 | 28.16 |
| CDY14036 | Canola | nucleus | 23.04 | 28.04 |
| CDY02130 | Canola | nucleus | 23.91 | 27.78 |
| CDY64666 | Canola | nucleus | 25.22 | 27.49 |
| CDX87222 | Canola | nucleus | 23.48 | 26.87 |
| CDY05842 | Canola | nucleus | 25.22 | 26.36 |
| CDX71695 | Canola | nucleus | 25.22 | 26.36 |
| CDY42869 | Canola | nucleus | 23.91 | 25.11 |
| CDY08986 | Canola | nucleus | 23.04 | 25.0 |
| CDY67760 | Canola | nucleus | 23.91 | 24.44 |
| CDY35515 | Canola | nucleus | 16.52 | 23.75 |
| CDY38399 | Canola | nucleus | 26.52 | 23.64 |
| CDX76570 | Canola | nucleus | 28.26 | 23.21 |
| CDY41042 | Canola | nucleus | 29.57 | 23.21 |
| CDY64687 | Canola | nucleus | 28.7 | 23.0 |
| CDY25977 | Canola | nucleus | 29.57 | 22.97 |
| CDY64966 | Canola | nucleus | 26.09 | 22.56 |
| CDX77755 | Canola | nucleus | 28.7 | 21.29 |
| CDY02129 | Canola | nucleus | 23.04 | 21.12 |
| CDY23052 | Canola | nucleus | 23.04 | 20.7 |
| CDY27922 | Canola | nucleus | 16.96 | 20.53 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078GR00 | UniProt:A0A078GR00 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY28965 | ProteinID:CDY28965 | ProteinID:CDY28965.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00041679001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF79 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE3B81 | SEG:seg | : | : | : | : |
Description
BnaA02g25110DBnaA02g25110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR00]
Coordinates
chrLK032228:+:410571..411389
Molecular Weight (calculated)
25658.9 Da
IEP (calculated)
5.491
GRAVY (calculated)
-0.624
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MMYGQSEVES DYALLESIRR HLLGGEAELW FAESIPSSCF TESWGDLPLK ENDSEDMLVY GLLNDPYDTS SPSSDLSCIT DFLDLETSSK RPSDPPVVKA
101: EPAESFAAAT VEKQKAATAK GKHYRGVRQR PWGKFAAEIR DPAKNGARVW LGTFETAEDA AFAYDRAAFR MRGSRALLNF PLRVNSGEPD PVRITSKRSY
201: TSSSSENGKL KRRRKTENVP SEFQVKCEVV
101: EPAESFAAAT VEKQKAATAK GKHYRGVRQR PWGKFAAEIR DPAKNGARVW LGTFETAEDA AFAYDRAAFR MRGSRALLNF PLRVNSGEPD PVRITSKRSY
201: TSSSSENGKL KRRRKTENVP SEFQVKCEVV
001: MYGQCNIESD YALLESITRH LLGGGGENEL RLNESTPSSC FTESWGGLPL KENDSEDMLV YGLLKDAFHF DTSSSDLSCL FDFPAVKVEP TENFTAMEEK
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
101: PKKAIPVTET AVKAKHYRGV RQRPWGKFAA EIRDPAKNGA RVWLGTFETA EDAALAYDIA AFRMRGSRAL LNFPLRVNSG EPDPVRITSK RSSSSSSSSS
201: SSTSSSENGK LKRRRKAENL TSEVVQVKCE VGDETRVDEL LVS
Arabidopsis Description
ERF2ERF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UCP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.