Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035732.1-P Field mustard nucleus 98.18 99.54
CDX71695 Canola nucleus 95.0 95.0
AT5G51190.1 Thale cress nucleus 79.09 78.73
GSMUA_Achr1P00480_001 Banana nucleus 37.73 42.35
CDY18225 Canola nucleus 25.45 42.11
CDY60663 Canola nucleus 25.45 41.79
CDY50478 Canola nucleus 25.0 41.67
CDY32941 Canola nucleus 25.0 41.67
CDX77538 Canola nucleus 23.64 41.6
CDY53187 Canola nucleus 25.0 40.74
CDY10057 Canola nucleus 25.0 40.74
GSMUA_Achr7P06910_001 Banana nucleus 42.73 39.83
CDX85071 Canola nucleus 24.09 38.41
CDY35516 Canola nucleus 24.09 38.41
CDX77537 Canola nucleus 24.09 38.13
CDX85070 Canola nucleus 23.18 36.96
CDY38399 Canola nucleus 43.18 36.82
GSMUA_Achr2P10490_001 Banana nucleus 37.27 34.89
CDY64687 Canola nucleus 45.45 34.84
CDY40779 Canola nucleus 28.64 34.62
CDY64966 Canola nucleus 41.82 34.59
Zm00001d029940_P001 Maize nucleus 37.73 34.44
TraesCS1A01G218100.1 Wheat nucleus 36.82 34.32
GSMUA_Achr11P... Banana nucleus 29.55 34.21
CDY38052 Canola nucleus 25.45 33.73
CDY27922 Canola nucleus 29.09 33.68
HORVU1Hr1G055710.1 Barley nucleus 36.82 33.47
CDY14036 Canola nucleus 28.64 33.33
CDX76570 Canola nucleus 42.27 33.21
CDY41042 Canola nucleus 44.09 33.11
CDY25977 Canola nucleus 44.09 32.77
TraesCS1B01G231500.1 Wheat nucleus 36.82 31.64
CDX77755 Canola nucleus 44.55 31.61
CDY60497 Canola nucleus 29.09 31.07
CDY64666 Canola nucleus 29.09 30.33
CDY42869 Canola nucleus 30.0 30.14
OQU92128 Sorghum nucleus 37.73 29.96
CDY67760 Canola nucleus 30.0 29.33
CDY16811 Canola nucleus 26.36 28.86
CDY23053 Canola nucleus 25.91 28.79
CDX87222 Canola nucleus 25.91 28.36
CDY02130 Canola nucleus 25.45 28.28
CDY33523 Canola nucleus 27.73 28.24
Os04t0547600-01 Rice nucleus 41.82 28.05
TraesCS2A01G417200.1 Wheat nucleus 41.82 27.38
CDX76569 Canola nucleus 22.27 27.22
TraesCS2B01G436200.1 Wheat nucleus 41.36 27.16
TraesCS2D01G414500.1 Wheat nucleus 41.36 27.08
TraesCS2D01G414300.1 Wheat nucleus 41.82 26.82
TraesCS2B01G436100.1 Wheat nucleus 41.36 26.69
Zm00001d002761_P001 Maize nucleus 38.18 26.67
CDX77750 Canola nucleus 26.82 26.58
TraesCS2A01G417100.1 Wheat nucleus 41.36 26.38
CDY23052 Canola nucleus 30.45 26.17
Zm00001d017466_P001 Maize nucleus 39.09 26.14
EES11211 Sorghum nucleus 38.18 26.01
CDY02129 Canola nucleus 29.55 25.9
CDY68787 Canola nucleus 26.36 25.78
CDY08986 Canola nucleus 24.55 25.47
CDY43434 Canola nucleus 26.36 25.44
CDY28965 Canola nucleus 26.36 25.22
KXG26835 Sorghum nucleus 38.18 25.15
KXG31094 Sorghum nucleus 39.09 25.15
CDY38401 Canola nucleus 25.91 25.11
HORVU6Hr1G062430.1 Barley nucleus 34.55 25.08
TraesCS6D01G225700.1 Wheat nucleus 35.91 24.92
EES11214 Sorghum nucleus 32.27 24.91
Zm00001d051340_P001 Maize nucleus 38.64 24.85
TraesCS6B01G280800.1 Wheat nucleus 35.91 24.84
TraesCS6A01G243500.1 Wheat nucleus 35.91 24.69
CDY65883 Canola nucleus 25.0 24.44
Zm00001d002760_P001 Maize nucleus 39.55 24.44
Os02t0655200-02 Rice nucleus 38.18 24.42
CDY35515 Canola nucleus 17.73 24.38
CDY25978 Canola nucleus 26.36 24.17
CDY27923 Canola nucleus 27.27 23.53
KXG26836 Sorghum nucleus 37.73 23.51
CDY56473 Canola nucleus 23.64 22.51
CDX74692 Canola nucleus 23.64 22.41
CDY30489 Canola nucleus 23.64 22.41
OQU76347 Sorghum nucleus 29.55 21.96
CDY23459 Canola nucleus 23.18 21.52
HORVU2Hr1G098140.2 Barley mitochondrion, nucleus 30.45 18.72
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10GO:A0A078EXX3InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfEnsemblPlants:CDY05842
ProteinID:CDY05842ProteinID:CDY05842.1InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00120974001InterPro:IPR001471InterPro:IPR036955PFAM:PF00847
PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31677PANTHER:PTHR31677:SF43SMART:SM00380SUPFAM:SSF54171
UniParc:UPI0004EEF29C:::::
Description
BnaA10g05780D
Coordinates
chrLK031965:-:654816..655478
Molecular Weight (calculated)
24438.7 Da
IEP (calculated)
8.989
GRAVY (calculated)
-0.683
Length
220 amino acids
Sequence
(BLAST)
001: MASSQDQSAL DLITQHLLTD FPSLETFVSS IHQSTTSTLS QRKPSLATIS VPTTAPVVQE DDHRHYRGVR RRPWGKYAAE IRDPNKKGVR VWLGTFDTAV
101: EAARGYDRAA FKLRGSKAIL NFPLEAGKHE DSGDNNNNNT VALKSKRKRP ETQDENHGRN LISHKAVKRE ETEAQGEACP LTPSSWMGFW DGVEGIGMGL
201: FYVPPLSPYP SLEHSQLGVK
Best Arabidopsis Sequence Match ( AT5G51190.1 )
(BLAST)
001: MASSHQQQQE QDQSALDLIT QHLLTDFPSL DTFASTIHHC TTSTLSQRKP PLATIAVPTT APVVQENDQR HYRGVRRRPW GKYAAEIRDP NKKGVRVWLG
101: TFDTAMEAAR GYDKAAFKLR GSKAILNFPL EAGKHEDLGD NKKTISLKAK RKRQVTEDES QLISRKAVKR EEAQVQADAC PLTPSSWKGF WDGADSKDMG
201: IFSVPLLSPC PSLGHSQLVV T
Arabidopsis Description
ERF105Ethylene-responsive transcription factor ERF105 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY90]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.