Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009250.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY60497 | Canola | nucleus | 96.21 | 98.54 |
| CDY40779 | Canola | nucleus | 74.88 | 86.81 |
| AT5G07580.1 | Thale cress | golgi, nucleus, plastid | 82.46 | 84.06 |
| CDY14036 | Canola | nucleus | 72.99 | 81.48 |
| CDY02130 | Canola | nucleus | 65.88 | 70.2 |
| CDY23053 | Canola | nucleus | 65.4 | 69.7 |
| CDY16811 | Canola | nucleus | 64.93 | 68.16 |
| CDX87222 | Canola | nucleus | 62.09 | 65.17 |
| KRG92180 | Soybean | nucleus | 38.86 | 41.21 |
| KRH34607 | Soybean | nucleus | 38.86 | 40.8 |
| Solyc05g052030.1.1 | Tomato | nucleus | 38.39 | 40.3 |
| PGSC0003DMT400041328 | Potato | nucleus | 38.39 | 39.32 |
| KRG90130 | Soybean | nucleus | 36.97 | 37.32 |
| CDX77538 | Canola | nucleus | 21.8 | 36.8 |
| CDY50478 | Canola | nucleus | 22.75 | 36.36 |
| CDY32941 | Canola | nucleus | 22.75 | 36.36 |
| CDX85071 | Canola | nucleus | 23.7 | 36.23 |
| CDX77537 | Canola | nucleus | 23.7 | 35.97 |
| CDY53187 | Canola | nucleus | 22.75 | 35.56 |
| CDY10057 | Canola | nucleus | 22.75 | 35.56 |
| CDY35516 | Canola | nucleus | 23.22 | 35.51 |
| CDY18225 | Canola | nucleus | 22.27 | 35.34 |
| CDY60663 | Canola | nucleus | 22.27 | 35.07 |
| GSMUA_Achr1P00480_001 | Banana | nucleus | 31.28 | 33.67 |
| KRH33376 | Soybean | nucleus | 35.07 | 33.64 |
| CDY42869 | Canola | nucleus | 34.6 | 33.33 |
| CDX85070 | Canola | nucleus | 21.33 | 32.61 |
| CDY38052 | Canola | nucleus | 25.59 | 32.53 |
| CDY67760 | Canola | nucleus | 34.6 | 32.44 |
| CDY02129 | Canola | nucleus | 35.55 | 29.88 |
| CDY23052 | Canola | nucleus | 36.02 | 29.69 |
| CDX71695 | Canola | nucleus | 30.81 | 29.55 |
| CDY05842 | Canola | nucleus | 30.33 | 29.09 |
| GSMUA_Achr11P... | Banana | nucleus | 24.64 | 27.37 |
| CDY33523 | Canola | nucleus | 27.96 | 27.31 |
| CDX76569 | Canola | nucleus | 23.22 | 27.22 |
| CDY38401 | Canola | nucleus | 28.91 | 26.87 |
| GSMUA_Achr2P10490_001 | Banana | nucleus | 29.86 | 26.81 |
| CDY65883 | Canola | nucleus | 28.44 | 26.67 |
| CDX77750 | Canola | nucleus | 27.96 | 26.58 |
| CDY43434 | Canola | nucleus | 27.96 | 25.88 |
| CDY68787 | Canola | nucleus | 27.49 | 25.78 |
| CDY28965 | Canola | nucleus | 27.49 | 25.22 |
| CDY25978 | Canola | nucleus | 28.44 | 25.0 |
| GSMUA_Achr7P06910_001 | Banana | nucleus | 27.96 | 25.0 |
| CDY27923 | Canola | nucleus | 29.86 | 24.71 |
| Zm00001d029940_P001 | Maize | nucleus | 27.49 | 24.07 |
| CDY38399 | Canola | nucleus | 29.38 | 24.03 |
| TraesCS1A01G218100.1 | Wheat | nucleus | 26.54 | 23.73 |
| CDY08986 | Canola | nucleus | 23.7 | 23.58 |
| HORVU1Hr1G055710.1 | Barley | nucleus | 27.01 | 23.55 |
| TraesCS1B01G231500.1 | Wheat | nucleus | 27.49 | 22.66 |
| CDY35515 | Canola | nucleus | 17.06 | 22.5 |
| CDY64966 | Canola | nucleus | 27.96 | 22.18 |
| CDX74692 | Canola | nucleus | 24.17 | 21.98 |
| CDY64687 | Canola | nucleus | 29.86 | 21.95 |
| CDX76570 | Canola | nucleus | 28.91 | 21.79 |
| CDY56473 | Canola | nucleus | 23.7 | 21.64 |
| CDY41042 | Canola | nucleus | 29.86 | 21.5 |
| OQU92128 | Sorghum | nucleus | 27.96 | 21.3 |
| CDY25977 | Canola | nucleus | 29.86 | 21.28 |
| CDY30489 | Canola | nucleus | 23.22 | 21.12 |
| CDY23459 | Canola | nucleus | 23.7 | 21.1 |
| CDX77755 | Canola | nucleus | 30.33 | 20.65 |
| HORVU6Hr1G062430.1 | Barley | nucleus | 27.49 | 19.14 |
| CDY27922 | Canola | nucleus | 17.06 | 18.95 |
| TraesCS2B01G436100.1 | Wheat | nucleus | 30.33 | 18.77 |
| TraesCS2A01G417200.1 | Wheat | nucleus | 29.86 | 18.75 |
| Zm00001d002761_P001 | Maize | nucleus | 27.96 | 18.73 |
| Os04t0547600-01 | Rice | nucleus | 28.91 | 18.6 |
| TraesCS6B01G280800.1 | Wheat | nucleus | 27.96 | 18.55 |
| Zm00001d017466_P001 | Maize | nucleus | 28.91 | 18.54 |
| TraesCS2B01G436200.1 | Wheat | nucleus | 29.38 | 18.51 |
| TraesCS2D01G414500.1 | Wheat | nucleus | 29.38 | 18.45 |
| TraesCS2D01G414300.1 | Wheat | nucleus | 29.86 | 18.37 |
| TraesCS6D01G225700.1 | Wheat | nucleus | 27.49 | 18.3 |
| EES11211 | Sorghum | nucleus | 27.96 | 18.27 |
| KXG26835 | Sorghum | nucleus | 28.91 | 18.26 |
| TraesCS2A01G417100.1 | Wheat | nucleus | 29.86 | 18.26 |
| TraesCS6A01G243500.1 | Wheat | nucleus | 27.49 | 18.12 |
| Zm00001d002760_P001 | Maize | nucleus | 30.33 | 17.98 |
| KXG26836 | Sorghum | nucleus | 29.38 | 17.56 |
| KXG31094 | Sorghum | nucleus | 28.44 | 17.54 |
| Zm00001d051340_P001 | Maize | nucleus | 28.44 | 17.54 |
| OQU76347 | Sorghum | nucleus | 23.7 | 16.89 |
| Os02t0655200-02 | Rice | nucleus | 27.01 | 16.57 |
| EES11214 | Sorghum | nucleus | 21.8 | 16.14 |
| HORVU2Hr1G098140.2 | Barley | mitochondrion, nucleus | 18.01 | 10.61 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078JG72 | UniProt:A0A078JG72 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY64666 | ProteinID:CDY64666 | ProteinID:CDY64666.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00042520001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF43 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI00025453A1 | SEG:seg | : | : | : | : |
Description
BnaA10g30200DBnaA10g30200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JG72]
Coordinates
chrLK034516:+:3972..5108
Molecular Weight (calculated)
23709.3 Da
IEP (calculated)
4.672
GRAVY (calculated)
-0.768
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFEESSDL DAIQEHLLED FLVADGFMGD FDFNASFVSG LWCIEPVMNQ VPKQEPDSPV LDPDSFVKEF LQVEVESSTS TGVSEQNSSP HETDQSVSPR
101: KEAKRLEEEE EPRHYRGVRR RPWGKFAAEI RDPAKKGSRI WLGTFESNVD AARAYDCAAF KLRGRKAVLN FPLDAGKYEA PVNSGRKRKR SDVQEELQRS
201: QSNSSSSSSD L
101: KEAKRLEEEE EPRHYRGVRR RPWGKFAAEI RDPAKKGSRI WLGTFESNVD AARAYDCAAF KLRGRKAVLN FPLDAGKYEA PVNSGRKRKR SDVQEELQRS
201: QSNSSSSSSD L
001: MASFEESSDL EAIQSHLLED LLVCDGFMGD FDFDASFVSG LWCIEPHVPK QEPDSPVLDP DSFVNEFLQV EGESSSSSSP ELNSSSSTYE TDQSVKKAER
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF
101: FEEEVDARHY RGVRRRPWGK FAAEIRDPAK KGSRIWLGTF ESDVDAARAY DCAAFKLRGR KAVLNFPLDA GKYEAPANSG RKRKRSDVHE ELQRTQSNSS
201: SSSCDAF
Arabidopsis Description
ERF106Ethylene-responsive transcription factor ERF106 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY05]
SUBAcon: [golgi,plastid,nucleus]
SUBAcon: [golgi,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.